Peromyscus maniculatus bairdii (prairie deer mouse): 102913891
Help
Entry
102913891 CDS
T11302
Symbol
Crocc
Name
(RefSeq) rootletin isoform X2
KO
K16469
rootletin
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmav03037
]
102913891 (Crocc)
Cilium and associated proteins [BR:
pmav03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102913891 (Crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
FKBP15
CCDC39
PUMA_CC
OVT1
Motif
Other DBs
NCBI-GeneID:
102913891
NCBI-ProteinID:
XP_015849859
Ensembl:
ENSPEMG00000004882
UniProt:
A0A8C8T3V0
LinkDB
All DBs
Position
2:complement(159838134..159883257)
Genome browser
AA seq
2009 aa
AA seq
DB search
MNLGLAESLQPQLALEIVIQTLESCVLRPDQEKSLSVQSPAQDSQGASLPVCIREVITRN
LSQPESPAPAQAPEMASLLPLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERL
EQAVRLETGELEAQEPKGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA
KILQYKKECSELEKQLLEKSTELEQQRLRDTEHSQDLDSALLRLEEEQQRSASLAQVNAM
LREQLDQANLANQTLSEDIRKVTSDWTRSCKELEQREAAWRREEESFNTYFSREHSRLLL
LWRQVMGLRRLVSEVKMGTERDLLQLGGELVRTSRAVQEVGLGLSASLQRAESRAEAALE
KQTLLQAQLEEQLRVKLLREKDLAQLQVQSDLDKADLSARVTELALSVEHLQNQNTEKDQ
VNRTLSDKLEALESLRLQEQAALDTEDGEGLQQTLRDLAQAALSDTESGVQLSSSGRTGD
TSDGSLRGLSGPRTPTPPRHSSPGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDM
RGRYEASQDLLGTVRKQLSDSESERRGLEEQLQRLQDQTAVTARAQEDALREAQRLRSAN
ELLSREKGSLAHSLQVTQQQAEELRQELEKLQSAQEELRRQHTQLEDEQEDSVQEGARAR
RELERSHRQLEQLEVKRSGLAKELVEVREALSCAILQRDVLQAEKAEVAEALTKAEAGRA
QLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLMAQLEEDKAALLDRQQQAEH
ATTFALEEQERLEQLRLEQEVERQGLEGSLCAAEQAREALELQLRALRSERSHLQEQLAQ
LSRQLSGRDQELEQALRESQRQVEALERTAREKEALAKERAGLAVQLAAAEREGRTLSEE
AIRLRLEKETLESSLFDVQRQLAQLEARREQLEADSQALLLAKEALTGELAGLRQQVTAT
EEKAALDKELMTQKLAQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQG
QLQQEREELLARMEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL
MGTRHSLAAISLEMERQKRDAQSRQEQDRNTVNTLTSELRELRAQLEEATAAHAQQVKEL
QEQAGALGRQRESCMREAEELRTQLRLLEDTRDGLRRELLEAQRKVRDSQEGSEAHRQEA
SELRRSLSEGTKEREALRRSNEELRTAVKKAESERISLKLANEDKEQKLALLEEARMSVG
REAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNARLGRELADLQGRLTQGERAEK
ESRREVLGLRQKLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEAHGTEK
KQLEVARGLELRLETVRVETSELGLRLSAAEGRAQGLEAELARVEAQRRVAEAQLGGLRS
ALRRGLGLGRVSSSPTREAPAGGSGDGLSSPSPLEYSPRSQPPSPGLVASPTPPDLDPEV
VRDALRDFLQELRSTQRERDELKVQTSTLSQQLAEMEAERDRATSRARQLQKAVAESEEA
WRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKM
KATEVKLENDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRV
DSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGTLRSKVQSLTDALAQSSASLTSTQ
DKNLHLQKTLSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELANLELQRG
DAEGQLQQLQQMLRQRQEGEATALRSVQKLQEERRLLQERLGSLQRALAQLEAEKREVER
SALRLDKDRVALRKTLDKVEREKLRSHEDTLRLNAEKGRLDRTLTGAELDLAEAQQQIQQ
LEAQVVALEQNHNPVPLEADEQRLELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEE
QVSMLKAQLQKELHRSSAPVPPPFGTPEQ
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagggctggcagaatccttgcagccccagctggcattggagattgtgatccag
acactggagagctgtgtcctgagaccagaccaagagaagagcctgagtgtgcagagccca
gcccaggactcccagggtgccagcctgccagtctgtatcagggaggtcatcacccgcaac
ctctctcagcctgagagtccagcccctgcccaggccccagagatggcttcgctgctgccg
ctgcaggaggagaaccagctgctgcagcaggagctgtcccgtgtggaggacctgctggcc
cagagccgtgccgagcgtgatgagcttgccatcaagtacaatgccgtcagtgagaggctg
gagcaggctgtgcggctggagacgggggagctggaggcgcaggagcccaaggggctggtg
cggcagagcgtggagctgcggaggcagctgcaggaggagcaggcctcctaccggcgcaag
ctgcaggcctaccaggagggccagcagcggcaagcccagctagtgcagcggctgcaggcc
aagattctgcagtacaagaaagagtgctcagagctggagaagcagttgctggagaagtcc
accgagctggagcagcagcgcctgagggacacagaacacagccaggacctggacagcgcc
cttctgcgtctggaggaggagcagcagagaagtgccagcctggcccaggtgaatgccatg
ctgagagagcagctggaccaggcaaacttggccaaccagactctgagcgaggacattcgc
aaggtgaccagtgactggacccgcagctgcaaggagctggagcagagggaggcagcatgg
aggcgcgaggaagagtccttcaacacctacttcagcagagagcacagccgtctgctcctc
ctctggaggcaggtcatggggctccgacggctggtcagcgaggtgaagatgggcaccgag
agagacctcctgcagctgggcggggagctagtccgcacatcccgggccgtccaggaggtg
ggcctgggactgagtgccagcctgcagcgggctgagagccgggctgaggcggctctggag
aagcaaacgctgctgcaggcccagctggaggagcagctgcgggtcaagctgctccgggag
aaggacctggcccagctgcaggtgcagagtgacctggacaaggctgaccttagtgccaga
gtgacagagctggccctgtccgtggagcaccttcagaaccagaacacagagaaggaccag
gtcaacaggaccctttccgacaagttggaggccctggagtctctgcggctccaggagcag
gcagccctggacactgaggatggagaggggctgcagcagacgctgagggacctagcacag
gctgctctatcggacacagaaagcggtgtccagctcagcagctcagggcgcactggggac
acctctgacggcagcctgcggggactctctggccctcggaccccgaccccaccacggcac
tcctccccgggtcgaggtcgttctccgcgccgaggcctgtccccagcctgctctgactcc
tccacgctcacgctgatccactccgccctgcacaagcgccagctgcaggtccaggacatg
cgtgggcgctatgaagccagccaagacctgctgggtaccgtgcgcaagcagctcagtgac
agcgagagtgagcggcgcggcctagaggagcagctgcagcgcctgcaggaccagacagcg
gtcacagcgcgggcccaagaggatgccctgcgtgaggcccagcgcctgcgcagtgccaac
gagctcctgagcagggagaagggcagcctggcccacagcctgcaggtgacccagcagcag
gctgaggagctgcgccaagaactggaaaagctgcagtcggcccaggaggagctgaggcgt
cagcacacccagttggaggacgagcaagaggactcggtgcaggagggcgcccgggcccgg
agagagctggagcgcagccacaggcagctggagcagttggaagtgaagcgctcagggctg
gctaaggagctggtggaggtgcgagaggcactgagctgtgccatactgcagagggatgtg
ctgcaggccgagaaggcagaggtggccgaggcgctgaccaaggctgaagctggccgtgca
cagctagagctctccctgaccaagctgagggcagaggaggcctcccttcgagactccctg
tccaagatgagtgccctcaatgagagtctcgcccaggacaagctggagttaaaccgcctc
atggcccagctagaggaagacaaggcggcgctcctggaccgacagcagcaggcagagcac
gccactacgtttgctctggaggagcaggaacgtttggagcagctgaggctggagcaggag
gtggagcgccagggtctggagggctccttgtgtgcggctgagcaggcccgggaggcgctg
gagctgcagctccgtgcattgcgcagtgaacgcagtcacctgcaggagcagttggcccag
ctctcccggcagctgagtggacgggaccaggagctggagcaggccctgcgggagtcacag
cggcaggtggaggcactggagcgcacagcccgggagaaggaggcactggccaaggagcgg
gctggcctggcagtgcagctcgcagcagcagagcgtgagggccggaccctgtcggaggag
gccattcgcctacgcttggagaaggaaaccctggagagcagcctgtttgacgtgcagagg
cagctggcacagctcgaggcccgccgggagcagttagaagccgacagtcaagccctgctg
ctggccaaagaagccctgactggggagctggcgggcctgcggcagcaggtcacagccacc
gaagagaaggcagccttggacaaggagctgatgacccagaagctggcgcaggctgagcgg
gaggcgcaggcctctctgcgggagcagcgggcagcccatgaggaagaccttcagagactc
cagcatgagaaggaggctgcgtggcgggaactgcaggcagagcgggcccagctgcagggc
cagctgcagcaggagcgagaggagctgctggcccggatggaggctgagaaggaggagctg
agcgaggagatcgcagcgctgcagcaggagcgggatgaaggcctgctcctggccgagagc
gagaagcagcaggccttgtccctgaaggagtctgagaagacggcactgtctgagaagttg
atggggacccggcacagtctggctgccatctctctggagatggaacggcagaagcgagat
gctcagagccggcaggaacaggaccggaacacagtgaacaccctgacatctgagcttcga
gagctccgggcccagctggaggaggccacggcggcccatgcccagcaggtgaaagaactc
caggagcaggctggggccctgggcaggcagcgggagtcctgcatgcgtgaggcagaagag
ctgaggactcagctgcgcctgttggaggacacccgtgatgggctgcggcgggagctgttg
gaggctcagcgcaaggtccgggacagccaggagggcagtgaggcccatcgccaggaggcc
agtgagctgcggcgcagtctgagtgagggcaccaaggagcgtgaggccctgcggcgttcc
aacgaggagctgaggactgcggtgaagaaggctgagagcgagcgcatcagcctgaagctt
gccaatgaagacaaggagcagaagctggctctcctggaggaggctcgaatgtccgtgggc
agggaggctggtgagctgcgggcctccctgcaggaggtggagcggtccaggctggaggcc
cgtcgggagctgcaggaacttcggcggcagatgaagacgctggacagtgacaatgccagg
ctgggccgggagctggcagacctgcagggccgattgacccagggcgagcgggcagagaag
gagagccggcgagaggtgctgggcctgcggcagaagctgctgaaaggcgagagcagcctg
gaggccttgaagcaggagcttcagggatcccagaggaagctgcaggagcaagaggctgag
ttccgggcgcgggagcgaggcctgctgggctccctggaggaggcgcacggcaccgagaag
aagcagctggaagtggcccggggcctggagctgaggctggagacggtgcgggtcgagacc
tcggagctggggttgcggctgagtgcggccgagggccgggcgcagggcctggaggcagag
cttgcccgcgtggaggcgcagcggcgggtggccgaggcccagctgggtggcctgcgctcc
gccctgcgccggggcctgggcctgggccgagtgtccagctccccaactcgggaagcacca
gcaggaggaagtggggatggtcttagcagccccagtcctttggaatatagccctcggtcc
cagccaccatctccagggctcgtggcctccccaacacctccagatttggacccagaggtg
gtgcgtgatgccctccgagactttcttcaagagctacggagtacccagcgggaacgggat
gaacttaaggtccagaccagcaccctcagtcagcagctggctgagatggaagcagagaga
gaccgtgcaacctcaagggccaggcagctgcagaaggcagtagctgagagcgaggaagcc
tggcgcagtgcagacaggcggctgagtggggcccaggcagagctggcactgcaggaggag
agcgtgcggcgtagcaagcgggagtgcagagccaccctggaccagatggcagtgctggag
aggagcctgcaggccaccgagagcgagctccgcgccagccaggagaaagtcagcaagatg
aaggccaccgaggtgaagctcgagaacgacaagcggcgcctgaaggaggtgctggacgcc
tctgagagtcgctccatcaagctggagctgcagcggcgtgctcttgaaggggagctgcag
cgcagccgcctgggtctgggggaccgtgaggcccacgctcaggccctccaggatcgggtt
gactccctgcagagacaggtggcagacagtgaggtgaaggcagggaccttgcagctaaca
gtggaacggctgaatggggcactggccaaggtggaggagagtgaggggaccctgcggagc
aaggtgcagagcctgacagatgccctggcccagagcagtgccagcctcaccagcacccag
gacaagaatctgcacctgcagaagaccttgagtacctgtgaacatgaccgccaagtgctc
caggaacggctggatgctgcccgacaggcattgtctgaagcacggcggcaaagcagctcc
ctgggtgagcaggtgcagactttgcggggcgagctcgccaacctggagctgcagcggggt
gatgctgagggccagctgcaacagctgcagcagatgctgagacagcggcaagaaggcgag
gccacagctctgcgctctgtccagaaactgcaggaagagcggcggctgctgcaggagcgt
ctgggcagtctgcagcgagccctggcccagctggaagctgagaaacgtgaggtggaacgg
tcagccctgcggctcgacaaggaccgtgtggcgctcaggaagacgctggataaggtggag
cgggagaagcttcgcagccatgaggacacactcaggttgaatgcagagaagggccgcctg
gaccgcacactcacaggggcggagctggacctggctgaggcccagcagcagatccagcag
ttggaggcacaggtggtggccctggagcagaaccacaatccggtcccactggaggcagac
gagcagcgtctggagctgcaacaggaggttgagcgcctgcgcagtgcccaggtgcagaca
gagcgcacactggaggcacgggagcgggcccaccgccagcgggtgtcgggactggaggag
caggtgtccatgctgaaggcacagctgcagaaggaactccacaggagctcagcacccgtc
cccccacccttcggcaccccagagcagtga
DBGET
integrated database retrieval system
