KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102914059
Entry
102914059         CDS       T11302                                 
Symbol
Wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmav03036]
    102914059 (Wdhd1)
Chromosome and associated proteins [BR:pmav03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    102914059 (Wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Ctf4_C WD40 HMG_WDHD1 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_RIG_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR35_TULP_N DSE1_N Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_1st eIF2A Beta-prop_VPS8 Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_NOL10_N Beta-prop_Nup120_160 HMG_box Tricorn_2nd Beta-prop_WDR75_1st PAC11 NrS1-1_pol-like_HBD Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 102914059
NCBI-ProteinID: XP_076400963
Ensembl: ENSPEMG00000009680
LinkDB
Position
9:complement(44977363..45020803)
AA seq 1122 aa
MPATQKPMRYGHTEGHTDVCFDDSGSFIVTCGSDGDVRMWEDLDDDDPKSINVGEKAFSC
ALKNGKLVTAVSNNTVQVYTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKI
VDVMDNSQQQTFRGHEAPVLSLSFDPKGTFLASSSCDGTVRVWNVSDQTCAVSWPVLQKC
NDVVNAKSICRLAWQPKTGKLLAVPVEKSVKLYRRETWSNPFDLSDSCISQTLNIVTWSP
CGQYLAAGTINGLIVVWNVETKDCMERVKHEKGYAVCGLAWHPTYDRICYTDVEGNLGIL
ENVCDLGGKVSSNTVSSRVEKDYNDLFDGDDTSSAGDFLNDNAVEIPSFPKGVINDEDED
DDDLMMAADRLRRRSHVLGDDENSLDATVLKTDLHKEEGEDDQAGSLHNLPLTKPQRPFY
DGPMPTPRQKPLQPSSTPLHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHL
PNAFNYTMGTLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIVDMPQSEDIEAICLG
QGWAAAATSALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGV
QLLELGQKKKQVLHGDPLPLTRKSYLAWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPI
CNIREHCRGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQTGTE
KGQMEEQFWHSVLFHNYLDYLAKNGYDYEESTKNQAVREQQELLMKMLALSCKLEREFRC
VELASLMTQNAVNLAIKYASRSRKLILAQKLSELAAEKAAELAETQTEEEEEEDFRRKLN
AGYSHTTTEWSQPRARNKVEEDTEDREETVPEEKLESHNHGQNLLQSTNSPDMPALKSGA
VFSSSQGRVNPFKVLVNSKEPAVSMNSSRSTNILDNMNKSSRKSTPLNRAANNEKSPVIK
PLIPKPKSKQASAASYFQKRTSQADKTEEVKENPKNSSSETPAICPQNSETQRPKTGFQM
WLEENRSHILCDNPDFSDEADIIKEGMIRFRVLSAEERKAWTNKAKGELASDGAEEKKRK
REICEPENQEEAAKENLDLSKKQKALGLSTNQKLSAFAFKQE
NT seq 3369 nt   +upstreamnt  +downstreamnt
atgccggccacacagaagcccatgaggtatggacatacggaaggacacaccgacgtctgt
tttgatgattctggaagttttattgtgacttgtggaagtgatggtgacgtgaggatgtgg
gaagatttggacgacgacgatcccaagtccattaatgtgggagaaaaggcattttcatgt
gccttgaagaatggaaaattggtcactgcagtttctaataacaccgtccaagtctataca
ttccctgaaggagttcctgatggcatactaacacgcttcactacaaatgcaaaccacgtg
gtcttcaatggagatggtactaaaattgctgctgggtcaagtgattttctggtcaaaatt
gtggacgtgatggataacagccagcagcaaacatttagaggccacgaagcccctgtttta
agtctgtcttttgatcccaagggtacctttctggcatcatctagttgtgatggaactgtc
agagtgtggaatgtttctgatcagacatgtgctgttagttggccagtactacaaaagtgc
aacgatgtggtgaacgccaagtccatctgcagactcgcgtggcagcccaaaaccgggaaa
ttactagcagttcctgtggaaaaatctgttaagctgtacagaagagagacttggagtaat
ccgtttgatctctccgatagttgtatctctcagacactcaatatagttacctggtctccc
tgtgggcagtatttggctgcaggtactattaatggcttaattgtagtttggaatgtggaa
accaaagactgcatggaaagggtaaaacacgagaaaggttatgcagtttgtggcctggcc
tggcatcctacttatgatcgaatatgttatactgatgtggaagggaaccttgggatcctg
gaaaatgtttgtgacctcggtggaaaggtgtcaagcaatacggtgtctagtagagtggaa
aaggattacaatgacctttttgatggagatgatacaagtagtgctggcgattttctaaat
gacaatgcggttgagatcccttcttttccaaaaggagttataaatgatgaggatgaggat
gatgatgacctcatgatggctgcagatcgtctccgacggcgaagccatgtcttgggagat
gatgaaaactcacttgatgctacagtgctaaaaaccgatcttcacaaagaggaaggggaa
gatgaccaggcaggcagtcttcacaatctcccccttacaaaaccccaaaggccattctac
gatgggcccatgccaacaccccgacaaaagccgttgcagcccagttctacacccttgcat
ctctctcacagattcatggtgtggaactctgttgggattattcgctgctataacgatgat
caagacagtgccatagatgtggagttccacgacacctccatccaccatgcaacgcacctg
cccaatgcattcaattacacaatgggaactctttcccatgaagcaattttgttggcctgt
gaaagcactgatgaactagcaagcaagcttcactgcctgcacttcagttcctgggattcc
agcaaagagtggatagtagacatgcctcagagtgaggatattgaagccatttgtctcggt
caagggtgggctgctgctgctactagtgccttgctcctccggctgtttactattggaggt
gttcagaaggaagtcttctgccttcctggacccgtggtgtccatggcaggacacggagaa
cagctttgcattgtttaccatagaggtacagggtttgatggagatcagtgccttggcgtt
caactgctcgagttggggcaaaagaaaaaacaggttttgcatggcgaccctcttcctctt
acaaggaaatcctaccttgcgtggctggggttttctgctgaaggtactccctgttatgtg
gattccgaaggctgtgttcgcatgcttaacagaggccttgggaatacatggactcctata
tgtaacataagagaacactgcagaggaaaatctgatcactactgggtggttggtatccat
gaaaatccccagcagctaaggtgcatcccttgtaaagggtctcggttccctcccaccctt
ccacgtcccgccgtggccatattatcctttaagcttccttattgtcagactgggacagag
aaaggccagatggaggaacaattttggcattcagtcttgtttcacaactaccttgattac
ttggctaaaaatggttatgactatgaggagagcactaaaaatcaggcagtaagagagcag
caagagcttctgatgaaaatgcttgcgctttcttgtaaactggaacgagaatttcgctgt
gtggaacttgccagtctgatgactcaaaatgctgtcaacttagccattaaatatgcttct
cgctctcggaaattaatattggctcaaaaactcagtgaactcgctgcagaaaaggcggct
gaattggcagaaacccagacagaagaagaggaagaagaggatttcagaagaaaactgaat
gctggttacagtcacaccactactgagtggagccagccacgggccagaaacaaagttgaa
gaagacactgaggacagagaagagactgttccagaagaaaaactggagtcacacaaccac
gggcagaacttactccagagtacaaattcccctgatatgccagcgctcaaatcaggtgca
gttttctctagcagccaaggacgggtaaaccccttcaaggtgctagttaattccaaagaa
ccagctgtatcgatgaattcatcacgctcaactaatattttggacaatatgaacaaatcc
tccaggaagtccacccctcttaatcgagcagcaaataatgaaaaatctccagttataaag
cctctcattcccaagccaaagtctaagcaggcgtctgcagcatcctatttccagaaaaga
acttcacaggcggacaagacagaggaagtaaaagaaaatcctaaaaattcatcatctgaa
actccagctatatgccctcaaaactcggaaacccaaaggccgaagactgggttccagatg
tggctggaagaaaatagaagccatattctgtgtgacaatcctgacttttcagatgaagcg
gacataataaaggagggaatgattcgatttagagtgttgtccgccgaagaaaggaaggca
tggaccaacaaggccaaaggagagcttgccagcgacggagccgaagagaagaagcgaaaa
cgtgagatctgtgagccagaaaaccaggaagaagcagcgaaggaaaatctggatctgtct
aaaaagcaaaaagcgttaggtctttccaccaatcagaaactgtcggcttttgcatttaaa
caagagtga

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