Peromyscus maniculatus bairdii (prairie deer mouse): 102914304
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Entry
102914304 CDS
T11302
Symbol
Lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2 isoform X1
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03018
RNA degradation
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102914304 (Lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
102914304 (Lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102914304 (Lsm2)
03041 Spliceosome [BR:
pmav03041
]
102914304 (Lsm2)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102914304 (Lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
102914304 (Lsm2)
Spliceosome [BR:
pmav03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102914304 (Lsm2)
Complex C
U2 snRNP components
102914304 (Lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102914304
NCBI-ProteinID:
XP_006995645
Ensembl:
ENSPEMG00000004437
UniProt:
A0A6I9M3M5
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Position
21:complement(2811844..2814876)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcctttttcaaatcccttgtgggcaaggatgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccactctgtggaccagtacctcaatatcaaacta
accgacatcagtgtcacagaccctgagaagtaccctcacatgctatcagtcaagaactgc
ttcatcaggggctcagtggtccgctatgtgcagctgccggccgacgaggtggacacacag
ctgctacaggacgcggcaaggaaggaagccctccagcagaagcagtga
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integrated database retrieval system
