Peromyscus maniculatus bairdii (prairie deer mouse): 102914501
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Entry
102914501 CDS
T11302
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04140
Autophagy - animal
pmav04211
Longevity regulating pathway
pmav05010
Alzheimer disease
pmav05014
Amyotrophic lateral sclerosis
pmav05016
Huntington disease
pmav05017
Spinocerebellar ataxia
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102914501 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102914501 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102914501 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
102914501 (Rb1cc1)
05016 Huntington disease
102914501 (Rb1cc1)
05017 Spinocerebellar ataxia
102914501 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
102914501 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmav01009
]
102914501 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102914501 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
pmav03029
]
102914501 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
pmav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102914501 (Rb1cc1)
Membrane trafficking [BR:
pmav04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102914501 (Rb1cc1)
Mitochondrial biogenesis [BR:
pmav03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102914501 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102914501
NCBI-ProteinID:
XP_006993513
UniProt:
A0A6I9LZV9
LinkDB
All DBs
Position
2:41376356..41422817
Genome browser
AA seq
1587 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEHEGAEKTEMKRSSEL
VLSPDMPRTTNTSLLTSFHKSVEHVAPDPTNAERGKELRESCQSTVQQEEASVDDKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFILECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTT
TSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETISHPNAEQTIHQASLDLDSLA
ESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSARGK
EGFGDRAALHVQLEKCRVAAQDSHVSIQTIKEDLCHLRTFVQKEQCDLSNSLKCTAVEIR
NIIEKVKCSLEITLKEKHQKELQSLKNEYECKLDALVKDSEENVNKIKKLKGDLVSLEEV
LQNKDNEFALIKREKDAVIFMQHEKDQKLLEMENIMHTQNCEIKELKQSREMVLEDMKKL
HVENDRKIESLKTEFQCLEQSHLKELEDTMHVRHTHEFEKVMTDHKVSLEKLKSENQQRI
DQILESHASTIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKLLLEESRTQQ
KETLKSLLEQETENLRTEIRKLNQKIHDNNENYQVGLSELRALMTIEKDQCISELISRHE
EESNILKAELDNVTSLHHQAFEIEKNLKEQIVELQSKLNSELNALEKQKDEKITQQEEKY
EALIQNLEKDKEKLVMSHEQDKEQLILKLTCEKDEAVQTALDEFKLERELVEKELLEKIK
HLENQVAKSPAFESSREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLI
AEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKL
EEEVSKLRTSSFIPSAPLVAAPELYGACAPELPGETERSAVETSDEGRVDSAMETSMMSV
QENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLV
LIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQA
KKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactgggaccactttgacatttgacactgagcta
actgtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgt
acctacagcgctggaacggacacaaatccaatttttctttttaataaagaaatgatctta
tgtgaccgtgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaggaatctcttatgatgcctgcagtttttcatactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaagctttgctctttctgtgaaggtcttgtc
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcataccaaaagcttcttttcaagtttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtctcagtgatggcc
aagattccactgttggagtgcctaaccagacatagctacagggaatgtttgggaagactg
gactctttaaatgaacatgaaggcgcagagaaaactgagatgaaaagatcctctgaactg
gtgctctctcctgatatgcctagaacaactaacacatctttgttaacctcatttcacaag
tcagtggagcatgtagctccagatcccaccaatgctgaacgtggcaaagaacttagggaa
tcttgtcaaagtactgtccagcaagaagaagcttcagtagatgataaagacagtgatcta
cctttttttaatgtttccttgttagactggataaatgttcaagatagacccaatgatgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatcttagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagataggctatatgccctggaccagatgattgctagctgtggccgg
ctggtaaatgaacagaaagagcttgctcagggatttttagctaatcaaatgagagctgaa
aacttgaaggatgcatctgtgttacctgatctgtgcctgagtcatgcaaatcagctaatg
attatgttgcaaaaccacagaaaattgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatctacatgtcagactgaagtggtgttgctttgtgatgcttcat
gctgatcaagatggagaaaaactgcaagcactgctccgccttgtgatagagctgttagaa
agagtcagaattgtcgaggctcttagcacagttccgcagatgtattgcctagctgttgtt
gaggttgtaaggaggaaaatgttcattaaacactacagagagtgggctggtgctctagtc
aaagatgggaaacaattgtatgaagctgaaaaatcaaaaagggaatcctttgggaaatta
tttaggaaatcctttttaagaaaccgtctgtttaagggactggactcttggcccccctca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagatatatcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagtgcagccgttcctcagggttccctta
ctttgtgactttgagcctttacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtg
tccacaagtcaggcatccccacagtcggctgcttctccaaggatagaaagtacaactact
acctcaccaaaaactcctcctccactaactgttcaggatcccttatgcccagcagtgtgt
cccttagaagaattatctccagatagtattgatgctcatacatttgattttgaaaccatc
tcccatccaaatgcagaacaaactattcaccaagcttcgttagacttggactcattagca
gaaagtcctgagtctgattttatgtctgctgtgaatgagtttgtgattgaagaaaattta
tcatctccaaaccctataagtgatccacaaagtccagaaatgatggtggagtcactttat
tcttcagtcatcaatgcaatagatagtaggcgcatgcaggacacaagtgcacgtggaaaa
gaggggtttggagatcgtgctgctctgcatgtccagctggagaagtgcagagttgctgcc
caagactctcacgtcagtatacaaaccatcaaggaagatctgtgccacctcagaacattt
gtacaaaaagagcagtgtgacttatcaaattctttaaaatgtacagcagtagaaataaga
aacattattgaaaaagtaaaatgctctctagaaataacactaaaggaaaaacatcagaaa
gaactccaatctttaaaaaatgagtatgaatgtaaacttgatgctctagtaaaagacagt
gaagaaaatgtaaataaaattaaaaaattgaaaggagatttagtatcccttgaagaggtt
ttacagaataaagacaatgaatttgctttgattaaacgtgaaaaggatgctgtcatcttc
atgcaacatgaaaaagatcagaagttgttagagatggaaaatataatgcatactcaaaat
tgtgaaattaaagaactaaagcagtcaagagagatggtgttagaagacatgaaaaagcta
catgttgaaaatgataggaaaatagaatcactgaaaaccgaatttcagtgcttagagcaa
agccacctaaaggaattagaagatacaatgcatgtcaggcacacacatgaatttgagaaa
gttatgacagaccacaaagtgtctttggagaaattaaaaagtgaaaatcaacaaagaatt
gaccagatactggaatctcatgcctcaactatccaggaaaaagaacaacagctacaggaa
ttgaaactcaaggtttctgatttgtcagacatgaggtgtaaattagaggttgaactcgca
ttaaaagaagcagaaacggatgagataaagcttttgttggaagagagtagaacacagcag
aaggagactttgaagtctctccttgaacaagagacagaaaatttgagaacagaaataaga
aaactaaaccaaaagattcacgataataatgagaattatcaagtgggcttatcagagtta
agagctttaatgacaattgaaaaagatcagtgcatttcagagttaattagtagacatgaa
gaagaatctaatatacttaaggctgaattagacaatgtaacatctttgcatcaccaagca
tttgaaatagaaaaaaacctgaaagaacaaatagttgaactgcagagtaaattgaattca
gaactgaatgcgcttgaaaaacaaaaagatgaaaaaataacccagcaagaagagaagtat
gaggctcttatccagaaccttgagaaagacaaggagaaattggtcatgagccacgaacag
gacaaagaacagctaattctgaaacttacttgtgaaaaagatgaagctgttcaaactgca
ctagatgaatttaaattggagagagaacttgttgagaaagagttattagaaaaaattaaa
catcttgagaatcaagtagccaaaagtcctgcatttgaatcatccagagaagattcttca
agcttagttgctgaacttcaagagaagcttcaggaagaaaaagctaagtttctagaacag
cttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaatgttcgaacatctttaatt
gctgaacaacagaccaattttaacactgttttaacaagagagaaaatgaggaaagaaaac
attataaatgatcttagtgataagttaaaaagtacaatgcaacaacaagagcgtgataaa
gatttgatagagtcactttctgaggatcgagctcgtttgcttgaagaaaagaaaaagctt
gaagaagaagtgagtaaactgcgtactagcagttttattccctcggcacctctggttgca
gccccagagctttatggagcttgtgcacctgagctcccaggtgagacagagagatcagcc
gtggagacatcagatgaaggaagagtggactcggcaatggagacaagcatgatgtctgtc
caagaaaacatgctatctgaagagaaacagaggatcatgcttctagaacggacattgcag
ttgaaggaagaagaaaacaagcggttaaatcaaagactgatgtctcagagcatgtcctca
gtatcttcacggcattctgaaaaaatagccattcgagattttcaggtgggagatttggtt
ctcatcatcctagatgagcggcatgacaattatgtgttgtttactgttagtcctactttg
tattttctgcattcagagtctcttcctgccttggacctcaaaccaggtgagggagcttca
ggtgcatctagaagaccctgggtccttggaaaagtaatggaaaaggaatattgtcaagcc
aaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaagct
gtgtcatggaataagaaagtatag
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integrated database retrieval system
