Peromyscus maniculatus bairdii (prairie deer mouse): 102914805
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Entry
102914805 CDS
T11302
Symbol
Nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102914805 (Nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmav03009
]
102914805 (Nvl)
Ribosome biogenesis [BR:
pmav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
102914805 (Nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
AAA_2
AAA_33
AAA_28
RNA_helicase
nSTAND3
AAA_18
NPHP3_N
Mg_chelatase
ABC_tran
NACHT
ATPase
IstB_IS21
Zeta_toxin
TsaE
Rad17
AAA_3
Viral_helicase1
AAA_17
nSTAND_NTPase5
Parvo_NS1
Vps4_C
Creb_binding
Motif
Other DBs
NCBI-GeneID:
102914805
NCBI-ProteinID:
XP_042114661
Ensembl:
ENSPEMG00000001236
LinkDB
All DBs
Position
11:complement(89798986..89864523)
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AA seq
854 aa
AA seq
DB search
MKPRPAVFVDGRLKQRVVQYLASNRCGKYVDTGILASDLQRMYSVDYGRRKRNAFRIQVE
KVFNVISSEKELKNLKELEDEHLSKRARRDEDDEYTESYSDDDSDMEDYPDPQSANHMNS
SLLSLYRKGNPDSVSNTPKLEQREATTSVPLLTSKTGSMPLKTPAKESEGGWFIDKTPGG
KKESLPSDLSDDQSNYKKPDSEVQTLKDSSLLESDKKRKGRPKSKGNKRKTEALQEVDGE
IEASLQKKAKARSIELQISSVKFEDVGGNDATLKEVCKMLIHMRHPEVYHHLGVVPPRGV
LLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIV
FIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNMAATARVLVVGATNRPDSLDPALR
RAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREA
AMCAVNRVLMKQQEQQKSPEMEALPPEGGQEERQGTEPTSGTQDELQRLLRLLRDQDPLS
QEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIREELIMAILAPVR
NPDQFRTLGLVTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERA
VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILA
ATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLEAIGSD
LRCNCYTGADLSALVREASLCALRQEITGQKSAVGTGELKVSHKHFEDAFRKVKPSISIK
DQKMYEALQRSLSQ
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggccggcggtgttcgtggacgggaggctgaagcagcgggtcgttcagtac
ctcgccagtaatagatgtggcaaatatgtagacactggaatcttagcatctgacttgcaa
agaatgtacagtgtagattatggccgaagaaaaagaaatgcttttaggattcaggtagaa
aaagtatttaacgtaattagtagtgagaaagaactgaagaatcttaaggaattagaagat
gaacatctgtcaaaaagagcacgaagagacgaagacgatgagtacactgaaagctattct
gatgatgattcagacatggaagattacccggatccacagtcagcaaatcacatgaacagt
tccctgctatctctgtatcggaaaggaaaccctgattctgtttcaaacactccgaagttg
gaacagagagaagccaccacttcagtgccattactgacttctaaaacgggctccatgcca
ttgaagacccctgccaaagaatctgagggaggatggtttattgacaaaaccccaggtgga
aagaaagaaagtcttccttcagacctatcagatgaccaaagcaactataaaaagccagat
tctgaggtacagactttaaaagattcttctcttctggaaagtgataagaaaaggaaaggt
aggccaaagagcaaaggaaacaaaagaaagacagaggctcttcaagaagtagatggagaa
atagaagctagtctgcagaagaaagctaaagcaaggagtatagagttgcagatttccagt
gtgaagtttgaagatgttggaggcaatgatgcaacattaaaagaagtatgcaagatgctc
atccacatgcgtcacccagaggtataccaccaccttggtgtagtgccccctcgtggagtt
ctcttgcatgggccaccaggctgtgggaagacattacttgctcatgcaattgctggggag
cttgatttgccaattctgaaagtggctgcaccagagattgtgtcaggagtttctggagag
tctgagcaaaagctccgagatttatttgaccaagctgtgtcaaacgcaccctgtattgtt
ttcattgatgaaattgatgctattacccccaaaagagaagtcgcttcaaaagatatggaa
cgaagaattgtagcccagcttctaacctgcatggatgatctgaacaacatggcagctaca
gctcgagtcctagttgttggagctactaaccgaccagactcgttggatcctgccttgaga
cgtgcaggaaggtttgaccgagaagtatgcctgggtatccctgatgaggctgccagagaa
agaatacttcaaactttgtgccgaaaactgagacttccggaaacttttaatttttgtcac
ttagcacacctaactccgggctttgtcggtgctgatctgatggcactttgccgagaggca
gccatgtgtgcagtcaatagggtcttgatgaagcagcaggagcagcagaagagtcctgag
atggaagctttgccccctgaaggaggccaggaggagaggcaggggaccgagcccacttct
ggaacccaggatgaattgcaaaggctgttgaggttgctaagagaccaagatcccctctca
caagaacagatgcaaggactttgcattgaattaaatgatttcattgttgctctagcggaa
gtccagccttctgccaaaagggaaggctttgtaactgtccctaatgtgacatgggccgat
attggtgccctggaagatattagagaagagctcataatggcaatattggcaccggtacgt
aacccagaccagttcagaactcttggtttggtgactccagctggcatcctcctagctggt
cctcctggatgtggaaaaactctgctagcaaaggctgtggcaaatgagtctggactaaat
tttatatccgtcaaaggccctgaattattaaatatgtacgttggtgagagcgaacgtgct
gtgcggcaggtttttcaacgagccaagaactcagcaccctgtgtgatattttttgatgaa
gtggatgctttatgccctcgaagatcagaccgagaaacaggcgctagtgttcgagtggtg
aatcagctgcttacggagatggatgggttggaaacacgtcagcaagtttttattttggct
gccactaataggccagatatcattgaccctgccattctgcggccaggccgactggacaaa
acactctttgtaggtttgcctcccccggcagaccgtgttgccatattgaagactatcaca
aaaaatggcaccaaacctccactggatgaagatgtaaatttggaagcaattggcagtgac
cttcgctgtaattgctatacgggtgcagacctctctgctttggtccgagaagcttccctc
tgtgccctgagacaagaaataacaggacagaagagtgcagttggaacaggtgagctcaag
gtcagccataagcattttgaagacgctttcaggaaagtaaaaccatctatatcaataaag
gatcaaaagatgtatgaagccctgcagaggtccctcagtcagtga
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