Peromyscus maniculatus bairdii (prairie deer mouse): 102915023
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Entry
102915023 CDS
T11302
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102915023 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102915023 (Tubgcp6)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
102915023 (Tubgcp6)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
102915023 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
APOBEC2
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
102915023
NCBI-ProteinID:
XP_006976200
Ensembl:
ENSPEMG00000022065
LinkDB
All DBs
Position
20:complement(58584151..58607437)
Genome browser
AA seq
1826 aa
AA seq
DB search
MASITQLFDDLCEALLPAAQARPGQRSVNRKRAKLSLKRVAYNALFANLFQEETHQRQPD
SSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLEASPGCPLVEVESVLDLLVQLAGS
GPPQVLRRKRDYFFNNKHAGRNVPYSGYDCYDLSVLEMDVRSLISGEEYLCHNMVQEAVQ
VMEAAPGTGLPTVGLFSAGDSCGDRFERDTRVSLFGALVHSRTCDMDVRLDLPPVPDSAD
FSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMTPDLDLWEAVLTYEASKRRCWERI
GCPPGHREEPYLTEAGRDAFDRFCRLCHGELQALSGGLLQAPKPVLVEESELVKDSLNVL
LGVVSATFSLCQPTQAFVVELGVHVSGASPESISSILSEVAEYGTYYTRLSHFSLQPVVG
SSCSRGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
TVSLATSGEPRPVFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVY
SGVFRDVYGEFMIQVNHEYLSFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGKT
INLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSISKEEK
ELRMEIAKQELIVHAREAASRVLRELSDRQMSEQMAVDTRKREQFQRLKEQFVKDQERRL
AARQEELDDDFSYARELRDREKRLKALEEELERKARQALVDHYSKLSAEAARREQKALWR
IQRHRLESARLRFLLEDQKSIQEMLRDMEAHPPQEPLSVFPSTCPQVPSPGPEHADEGHS
CDLGSAELRWDHPSPPSASTPSALQSAAEGVDDPGAGQAEGAGPFSPGLSITDFLPVGPG
AEQPVDNTGAPFLEVALQTISSDLSPVTPGPALTAAGPQPIQSEYDFNTILRPAVATSSS
PGPSQDVQNGLDSEKQHLLDMPTKLDACVHDMQETLPCPHPLKHVTSEEGTFQPVGQLLE
HISGTAVSAESLASGMAPCQPLSISGCVSDASIKQGDYMSDVVLPQPQWNIHGHLSHAST
GAGENVSEVAPSRPRWNVHGHVSEASIRIGENVSDVAPSRPRWNVHGHVSEANIRIGENV
SDVAPSRPRWNVHGHVSEASIKIGENVSDVAPSRPRWNVHGHVSEASIRIGENVSDVTPS
RPRWNIHGHVSDANIKIGENVSDVTPSRPRWNVHGHVSEASIRIGENVSDVTPSRPRWNV
HGHVSDASIRIGDSVSEEALQPHGCTQPPLILEEPLPEAEPDLLTPQQCPPACVSPSGLH
VEAQSPVGESGPQLPGETKPTLCSSLGSTEEGSVQTKPPAVAEPSTLGNGIPEETGPGRR
RDAEDLSPWPPSSQEDTAVPSSPGPSEEVSDTEAEARRWGKEQAYLADLTKLYHLEQYPD
SYESMSEPPVAHLVHHMLPQAFAFPVDPQVQSAVDETAVQLSELLTLPVLMKRSLTAPLA
AHVSLVNKAAVDYFFVELHLETHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELL
NPLVLNSILSKALQYSLHGDTPHAANLSFALKYLPEVFAPNAPDVLSCLELRYKVDWPLN
IVITESCLNKYSGIFSFLLQLKLMMWTLKDICFHLKRTALVSHTAGSVQFRQLQLFKHEM
QHFVKVIQGYIANQILHVSWCEFRARLAVVGDLEEIQRAHAEYLHRAVFRGLLTEKAAPV
MNIIHSIFSLVLKFRSQLISQSWGPATGPRGAEHPNFPLMQQSYSTFKYYSHFLFKVVTK
LVNRGYQPHLEDFLLRINFNNYYQDS
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatcacccagctgttcgatgacctctgcgaggctctcttacctgctgcccag
gctcgcccgggccagcgcagcgtgaataggaagagggcaaagctgagccttaagagggta
gcctacaatgctcttttcgccaatcttttccaagaggagactcatcagcggcagcccgac
tcgtcgaagctcccagtgaaaaacaaggtcctcatgctgtcctttgatttgagggtgggc
ggcttggggccagaggccgaccgtttggaggagcttgtggagaagttggaagccagccct
ggctgtcctcttgtggaggtggagtcggtgctggacctcttggttcagctggcagggagc
ggccctcctcaagtgctgcggagaaaacgggattacttctttaacaacaagcacgcaggc
agaaacgtaccctacagcggctacgattgctatgacctgagtgtgttggaaatggacgtt
cggtcgcttatctccggagaggagtatttgtgtcataacatggtccaggaagcagttcaa
gtgatggaggctgccccaggcactggcctgcccaccgttgggctcttctcagcgggtgac
tcttgtggtgacaggttcgagagagacacccgggtctcactctttggtgcccttgtccac
agccgcacatgtgacatggatgtgcgtctggatctgccccctgtgccggacagcgcagac
ttttccgggctggccattaaggtcccacagattgtggatcaatgggaagatgaagggttc
caatcagcttccaatttaactcctgactcccagtctgaaccaagcatgaccccggacttg
gacctgtgggaagctgtgctcacatacgaagccagcaagcggaggtgctgggagcgcatt
ggatgcccccctggtcaccgagaggagccctacctcaccgaggcagggagggatgccttt
gacaggttctgcaggctctgtcatggagagctacaggccctcagtgggggtctgctacag
gcccccaagcctgtgctggtggaggaaagcgagctggtgaaagactcactgaatgtcctg
ctgggtgtggtgtccgctacattttctctctgtcagccaacacaagcctttgtagtggag
ttgggtgtccatgtgtcaggcgcatctcctgagagcatcagcagcatcctttccgaagtg
gcggagtatgggacctactacacacgcctgagccacttctctctacagcccgtcgtaggc
tcctcgtgcagcaggggccttgtgttccaggccttcaccagcggcctgcggaggtacttg
cagtattaccgggcctgtgttctctccaccccgcctaccctgagtctcctcaccattggc
tttctcttcaagaaactgggccggcagctcaggtacttggctgagctttgtggtgttggc
actgtatccctggcaaccagcggagaacccaggcctgtcttccccactggagtgaagctt
ctgtcctacctctaccaggaggcactggataactgtagtaatgagcactatcccgtgttg
ctgtccctgctgaagaccagctgtgagccctacacacggttcatccatgattgggtgtac
agtggagtcttcagagatgtttatggggagttcatgatccaagttaaccatgagtacctc
agcttccgagacaagttttactggacccatggctacgtgctcatttccaaagaggtggag
gactgtgttcccgtgttcttgaaacatattgcccacgatgtgtacgtctgtgggaagacc
atcaacctgctgaagctctgctgtccccggcactatctctgttggtctgatgtccccgtc
cctcgtatctcggtgatcttctctctcgaggagctgaaggagatcgagaaggactgtgct
gtctacgtcgggcggatggagagagttgcccgtcatagctccatcagcaaggaggaaaag
gaattgcgtatggaaattgcaaaacaagaactaattgtccatgcccgggaagcagcatct
cgggtcctgagagagctgagtgaccggcagatgtcagaacagatggctgtggacaccagg
aagcgagagcagtttcagcggctgaaggaacagtttgtgaaggatcaggagcgacgcctg
gcggctagacaagaggagctagatgatgatttcagctatgcccgtgagctccgtgatcgg
gagaagaggctcaaggccctggaggaagagctggagaggaaggccaggcaggcactggtt
gaccattacagcaagttgtctgcagaggcagctcgccgggagcagaaggctctgtggaga
atccagaggcaccggctagagagcgcacgcctccgtttcctcctggaagaccagaagagc
attcaggagatgctgagagacatggaggctcacccgccccaggagccgctgagcgtgttc
ccaagcacatgccctcaggtcccatctccaggtcctgagcatgcagatgaaggccatagc
tgtgatctggggtctgcagaactgcgttgggatcatccaagtccaccaagtgcatcaaca
ccatcagccctccagtctgcggcagagggagtggatgaccctggtgctgggcaggcagag
ggagctgggcccttctctcctggtctcagcatcacagactttctgcccgtgggccctggg
gccgagcagcctgtggataacactggagctcccttcttagaggtggcactgcagaccatc
tcttcagacctgtcccctgtaactcctgggccagcactcacagcagctggcccccagcct
atccagtcagagtatgatttcaataccatcctgaggccagctgtggccacctcctcttca
ccaggaccctcgcaggatgtccaaaacggtttggacagtgaaaagcagcatctattggac
atgcccacaaaactggatgcatgtgtccatgacatgcaagagactttgccttgcccacat
ccactcaaacatgtcacttctgaggaggggaccttccagcctgtggggcagctccttgaa
cacatatcagggactgctgtctctgcagagagccttgcttctggaatggctccttgccag
ccacttagcatttccggatgcgtgtcagatgccagcatcaagcagggggactatatgtca
gacgtggttcttcctcagccacagtggaacatccatggacatttgtcacatgccagcact
ggagctggggagaatgtgtcagaagtggctccttcccggccacggtggaatgtccacgga
catgtgtcagaggccagcatcaggattggggagaatgtatcagatgtggctccttcccgg
ccacggtggaatgtccacggacatgtgtcagaggccaacatcaggattggggagaatgtg
tcagatgtggctccttcccggccacggtggaatgtccacggacatgtgtcagaggcaagc
atcaagattggggagaatgtgtcagatgtggctccttcccggccacggtggaatgtccac
ggacatgtgtcagaggccagcatcaggattggggaaaatgtgtcagatgtgactccttcc
cggccacggtggaacattcatggacacgtgtcagatgccaacatcaagattggggagaat
gtgtcagatgtgactccttctcggccacggtggaatgtccacggacatgtgtcagaggca
agcatcaggattggggaaaatgtgtcagatgtgactccttctcggccacggtggaatgtc
catggacacgtgtcagatgccagcatcaggattggggacagtgtgtcagaagaggctctt
cagccacatggatgtactcagcctcccttgattctggaggagcccttgccagaagctgag
cctgacctcctcacgccccagcagtgccctcctgcctgtgtgtccccgtcaggccttcat
gtggaagcacagagccctgttggggaaagcgggccacagctacctggagaaacgaagccc
accctctgttctagtcttggcagcacagaagaaggtagtgtacagaccaagccccctgct
gtggctgagcctagcacgctgggaaatggcatccctgaagagacaggtccagggaggagg
agggatgcagaagacctctctccatggcctccaagctcacaggaagacacagcggttcca
agcagcccaggccctagtgaggaggtctcggacacagaggctgaggccagacggtggggc
aaggagcaggcctatttggcagacctcacaaagctctaccacctggagcagtacccagac
agctacgaatccatgtcagagcctcctgtggctcacctggtccatcacatgcttccccag
gcctttgctttccccgtggacccccaagttcagtcagcggtggatgagactgcagtgcag
ctaagtgagctgctgacgctgcctgtgctgatgaagcgctcgctcacggcacctctggct
gcccatgtcagcctggtgaacaaagctgcggtcgactatttctttgtggagctgcacctg
gagacacactttgaagcactgcgccatttcctgctgatggaagatggagagttcgcgcag
tcccttagtgacctgctctttgagaagctcggggctggacagacgcctggggagctgctc
aacccactggtccttaacagcatcctgagcaaggcactgcagtacagcctccacggggac
acgccacatgctgccaacctgtcttttgccctcaagtacctgcctgaggtgtttgcccct
aatgcgccggatgtgctgagctgcctggagctcaggtacaaggttgactggcccctcaac
atcgttatcaccgagagctgcctgaacaagtacagtggtatcttctccttcctgttgcag
ctgaagctcatgatgtggacactcaaagacatctgcttccacctcaagcgcacagccctg
gtgagccacacagctggatcagtgcagttccgccagctgcagctgtttaagcacgagatg
cagcatttcgtgaaggtcatccagggctacattgctaaccagatcctgcatgtcagctgg
tgtgaattcagggcccggctagctgtagtaggtgacctggaggagatccagcgggcccat
gccgagtacctgcacagggctgttttcaggggcctgctgactgagaaggcggcaccagtc
atgaacatcatccatagcatcttcagcctggtgctcaagttccgtagccagctcatctcc
cagagctggggcccggctactggcccccgtggtgccgagcaccccaacttcccgctcatg
cagcagtcctacagcaccttcaagtactactcccacttccttttcaaagtagtgaccaag
cttgtgaaccgtggctatcagccccaccttgaggacttcctgcttcgaatcaacttcaac
aactactaccaggactcctga
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