Peromyscus maniculatus bairdii (prairie deer mouse): 102915924
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Entry
102915924 CDS
T11302
Symbol
Cald1
Name
(RefSeq) caldesmon isoform X9
KO
K12327
caldesmon
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
102915924 (Cald1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102915924 (Cald1)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
102915924 (Cald1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
102915924
NCBI-ProteinID:
XP_015864153
Ensembl:
ENSPEMG00000022090
LinkDB
All DBs
Position
3:complement(56300935..56486991)
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AA seq
536 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVTDQVEAHAQNSVPDEESKPATTNTQVEGDEEAALLERLARREERRQKRLQEALERQKE
FDPTITDASLSVPSRRMQNDMAENETAEKEEKRESRPGRYEVEETEVVTKSYQKNSYQDA
EDKKKEEQEEEEEKLKGGSLGENQIKDEKIKKDKEPKEEVKSFLDRKKGFTEVKAQNGEF
MTHKLKQTENAFSPSRPGGRAGGDKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQK
QQEAALELEELKKKREERRKVLEEEEQKRKQEEADRKAREEEEKRRLKEEIEKRRAEAAE
KRQKMPEDGLSEDKKPFKCFTPKGSSLKIEERAEFLNKSVQKSGVKSTHQAAVVSKIDSR
LEQYTNAIEGTKASKPTKPAASDLPVPAEGVRNIKSMWERGNVFSSPSASGTPNKETAGL
KVGVSSRINEWLTKSPDGNKSPAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKQV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacgattttgagcgtcgcagagaactcaggaggcaaaagagggaggagatgcggctg
gaagcagagagaatcgcctatcagaggaatgatgatgacgaggaagaggccgccagggaa
cggcgccgccgagcccggcaggaaaggctgcgtcagaagcaggaggaagagtccttggga
caggtgacagaccaggtggaagcccatgcccagaacagtgtccctgatgaagagtctaag
ccagccaccacgaacactcaggtagaaggtgatgaggaggctgccttactggagcgcctg
gctaggcgagaagagaggcgtcaaaaacgcctccaggaagccctcgagcgtcagaaggag
tttgatccaactatcacagatgccagtctgtccgtcccaagcagaagaatgcaaaatgac
atggcagaaaatgaaacagcagagaaggaagaaaaaagagagagtcgcccaggacgatat
gaggtggaggaaacagaagtcgtcaccaagtcctaccagaagaacagctatcaggatgct
gaagacaaaaagaaagaagaacaggaggaggaggaagagaagctgaagggagggagcctt
ggcgaaaatcagatcaaagatgagaagattaaaaaggacaaagaacccaaagaagaagtc
aagagcttcttggatagaaagaaaggatttactgaagtgaaggcacagaatggagaattc
atgactcacaaacttaaacaaaccgagaacgctttcagccccagccgcccaggaggccgg
gctggtggggacaaggaagctgaaggtgccccacaggtggaagctggcaagcggctggag
gagctgcgcaggcgccgcggggagacggagagcgaagagtttgaaaaactcaaacagaaa
caacaggaggcggccttggagctggaagagctgaagaaaaagagggaggagagaaggaag
gtcctggaggaagaggagcagaaaaggaagcaggaggaagctgaccgcaaagctagagag
gaggaagagaagaggaggctaaaggaagagattgaaaagagaagggcagaagctgctgag
aaacgccagaagatgccggaagatggcttgtccgaggacaagaagccgttcaagtgtttc
actcctaaaggctcatctctcaagatagaggaacgagcagaatttttgaataagtctgtg
cagaaaagtggtgtcaaatctactcatcaagcagcagtagtctccaagattgacagcagg
ctggagcagtataccaatgcaattgagggaacaaaagcttcaaaacctactaagcctgca
gcatcagatcttcctgttcctgctgaaggtgtccgcaatatcaagagcatgtgggagaga
gggaacgtgttttcatccccctcggcctcgggaacaccaaataaggaaactgctggcctg
aaggtgggagtttctagccggatcaatgaatggctaactaaatcaccagatggcaataag
tcacctgctccaaagccttctgacttgaggccaggggatgtatctggcaagcgaaacctc
tgggaaaagcaatccgtggacaaggtcacttcccccactaagcaggtttga
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