Peromyscus maniculatus bairdii (prairie deer mouse): 102916026
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Entry
102916026 CDS
T11302
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102916026 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102916026 (Exosc1)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102916026 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102916026 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
102916026
NCBI-ProteinID:
XP_006990522
Ensembl:
ENSPEMG00000010710
UniProt:
A0A6I9LU91
LinkDB
All DBs
Position
1:complement(194210827..194223312)
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AA seq
195 aa
AA seq
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MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacccgtgagatactgcatccccggtgaacgtctgtgtaacttggaggaaggc
agccccggtagcggcacctacacccggcacggctacatcttttcgtctctggccggctgc
ctgacgaagaccagcgagaatggcgcgcttcctgtggtgtctgtgatgagagaaactgag
tcccagctacttccagatgtgggcgctgttgtcacctgtaaggtctctagcatcaactca
cgttttgccaaagtacacatcttgtatgtggggtccacaccactaaaaaacgcttttcga
ggaactatccgcaaggaagatatccgagcaactgaaaaagacaaggttgaaatttacaag
agtttccgcccgggtgacatagttttggccaaagttatctccctcggtgatgcacagtcc
aattacctgctgaccactgctgaaaacgaattaggggtggtggtagcccacagtgaatca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggccagagtgcagcctgagttcttacaaacctaa
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