Peromyscus maniculatus bairdii (prairie deer mouse): 102916459
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Entry
102916459 CDS
T11302
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102916459 (Chd7)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102916459 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
CHDCT2
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
102916459
NCBI-ProteinID:
XP_076420043
Ensembl:
ENSPEMG00000023028
LinkDB
All DBs
Position
2:complement(32653670..32837655)
Genome browser
AA seq
2985 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPPLHHPSTN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGGS
QMGVYPGMQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQPQPAPSGPPAQGHPQHM
QQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLSQGNPFIATSGPAHLSHMPQQSPSMA
PSLRHSVPQFHHHPPTALHGESVAHSPRFSPNPPQQGTVRPQTLNFSSRSQTAPSPTVNN
SGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSTPMNQSVPRYPNAVGFPSNSGQGLMHQQP
IHASGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMPMDVGS
YPNMPHPQPSHQPPGAMGLGQRNIGSRNMQQPRPFMGMSSAPRELTGHMRPNGCPGVGLA
DPQAIQERLMPGQQHPGQPSFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQNTP
QKVPVHQHSPSEPFLEKPVPDMTQVSGQNAQLVKSDDYLPSLEQQPQQKKKKKKNNHIVA
GDPSKSFGKDDFPGGVDNQELSRNSLDGSQEEKKKKKRPKVKKDPKELKEPKEKKEPKTP
KAPKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKAEGSENSDLDKTP
PPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSTTSQSEQ
QESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKR
IQQKIKRFKSKQGQNKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSL
PYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYRNNNKLREY
QLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNW
EREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDC
PELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL
EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT
NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKE
THNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY
PYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ
NDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNG
VQQLSKKEIEDLLRKGAYGALMEEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAK
ASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKED
ELMEFSDLESDSEEKPCTKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRYK
RQLAEQDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVPR
GRKGKKVKTQSTQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQE
VIGDQADKILEGADSSEADVWIPEPFHAEVPADWWDREADKSLLIGVFKHGYEKYNSMRA
DPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRVPFKDEIDEF
ANSPPEDKEESMEIHSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMRQ
EALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQQ
FDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPEDEPPDLASLIEPITEERA
SRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSR
TDYHILNDPELSFLDAHKSFAQNRGAGTVSSLNALAVGFGQAPPAISLAHAHEEKVIEQA
EGKAEESEPSPARERSDGKEEEEEAGSGAKDSRQDCEAEAGSLKSEPKGVEGSADPGSKA
VSEKGSEEDDEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYMED
GDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLIPGYTP
STMDSPLQKRGCAELSMVSQASISGSEDITTSPQLSKDDALNLSVPRQRRRRRRKVEIEA
ERAAKRRNLMEMVAQLRESQAASENGQEKVVDLSKASREATSSTSKFSSLTSKFILPNVS
TPVSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKNVEGLDLFFMSHKR
TAFSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPKNKDL
VDWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVN
KRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRG
EGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAG
LMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNSPLSAATGNATTAA
QGEPEDGPSKAEEKGNGNGDENRDSEKSTDAVSAADSANGSVGAATAPAALPSNPLAFNP
FLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGASEEKAADKAEGGPCKDGET
LEGSDAEDNLDKTAESSILEDEVAQGEELDSLEGGEEMENNGNAE
NT seq
8958 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatatattcagtgaaggc
cttgaaggccttggggaatgtggctaccctgaaaacccagtgaatcccatgggtcagcag
atgcccatagaccaaggtttcgcctccttacagccacctcttcatcatccttccacgaat
caaaatcaaaccaagttgacccattttgatcattataatcagtacgaacaaaagatgcac
ctgatggatcagcctaacaggatgatgggcagtgcccctgggaacggcttggcatctccc
cactcacagtatcacacccctcccgttccccaggtgccgcacggaggcagtggcggcagt
cagatgggagtctatcctggcatgcagaatgaaaggcacgggcaatcttttgtggacagc
ggctccatgtggggccctcgggctgttcaggtaccagaccagatacgagccccctaccag
caacagcaaccacagccagctccatcggggccaccggcacagggccacccgcagcacatg
cagcagatgggcagctatatggcacgtggggatttttccatgcagcagcatggccagcca
cagcagaggatgagccagttttcccaaggtcaagagggcctcagtcagggaaatcctttc
atcgccacctcaggaccggcccacttgtcgcacatgccccagcagagccccagcatggca
ccttcgctgcgccactcagtaccgcagtttcaccaccacccccctactgctctccacgga
gaatccgttgcccacagtcccagattctccccaaaccctcctcagcaagggactgtcagg
ccacaaacccttaactttagttctcggagccagacggccccctcccctactgtaaacaac
tcagggcagtattctcgatacccttacagtaacctaaatcagggattagttaacagtaca
gggatgaatcaaaatttaggccttacaaacagtactccaatgaatcagtccgtaccaaga
taccccaatgctgtagggttcccatcaaacagtggtcaaggactaatgcaccagcagccc
atccacgccagtggctcacttaaccaaatgaacacacaaactatgcatccttcacagcct
cagggaacttacgcctctccacctcccatgtcacccatgaaagcaatgagtaatccagca
ggcacgcctccgccacaagtcaggcccggaagtgctgggatgccaatggatgttggcagt
tatccaaatatgccccaccctcagccatctcaccagccccctggtgccatgggactcgga
cagaggaacatcggctccagaaacatgcagcagcctcgtccattcatgggcatgtcctcg
gccccgagggagttgaccgggcacatgagaccaaacggttgtcctggtgtgggccttgca
gacccacaggcaatccaggagcgactgatgcccggccagcaacatcctggtcagccgtct
tttcagcagttgccaacctgtcctccactacagccccacccaggcctgcaccagtcttcc
cctcctcaccctcatcaccagccttgggcacaactccacccgtcaccccagaataccccg
cagaaagtgcctgtgcatcagcattctccatcggagccctttctagagaagccagtgccg
gatatgactcaggtcagcggacagaatgctcagctcgtgaagagcgacgattacctgccg
tcgttagaacagcagccacagcagaagaagaagaaaaagaaaaacaaccacattgttgca
ggggatcccagtaaaagttttggtaaagatgacttccctggtggggttgataaccaagaa
ctaagcaggaactcactggatgggtcccaagaagaaaaaaagaaaaagaaaaggccgaaa
gtcaaaaaagatccgaaggaattgaaggaaccgaaggagaagaaagagcccaagacccca
aaagccccgaagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacaccaaaa
cccaaatccagcaaaaagtcaagtaataagaaaccggattcagaagcaagtgctttgaag
aaaaaggtcaacaaaggaaaagcagaaggttctgaaaattcagacttggacaaaacaccc
ccaccatcccctgctcctgaagaggacgaagacccaggtgttcagaagaggcggtccagc
aggcaggtgaagcggaagcgatacactgaagacttggagttcaagatttctgacgaggag
gcagatgatgcagatgctgctggcagagactctccatccaccacctcacagtcagagcag
caggaatctgttgatgcagaaggcccagtggtagagaagattatgagcagtcgttcagtg
aaaaagcagaaagaatctggagaggaggtagaagttgaggaattttatgtgaaatacaaa
aacttctcttatcttcattgtcaatgggcatctgtagaagatctggaaaaagataagaga
attcagcaaaagataaagagatttaagtcaaaacagggccagaacaaattcctttcagag
attgaggatgatctttttaatccagattatgtggaagttgaccggataatggactttgca
cgtagcacagatgaccggggcgagcccgtgactcactatttggtgaagtggtgctcactc
ccttacgaagacagcacatgggagctgaggcaggacatagatcaagcaaagattgaagag
tttgaaaaactcatgtccagggagccggaaacagagcgtgtggagcgacctcctgctgac
gactggaagaaatcggagagttccagggagtatagaaacaataacaaactcagggaatac
cagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatttta
gcagatgaaatgggtttgggaaagactatccagtccattacatttctctatgagatatat
ttgaaaggaatccatggcccttttttagtaattgccccactctccacgatccccaactgg
gaaagggaattccgaacctggacggagttaaacgtggttgtgtatcatgggagccaagct
agtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgata
aaggggtcctataagtttcatgccatcatcactacgtttgagatgattctgactgactgt
cctgagctgcgcaatattccctggcgctgtgtggtcattgatgaagcccacaggctgaag
aacaggaactgcaagctgctggagggacttaagatgatggacttggaacacaaagtgctg
ctgacggggaccccgttgcagaacacggtggaagaactcttcagcctgcttcacttcttg
gagccaagtcgcttcccttcagaaacaaccttcatgcaagaatttggtgatctgaaaacg
gaagagcaggtgcaaaaactacaggctattctaaagccaatgatgttgagacgtctcaaa
gaggatgtagaaaagaacttggcccccaaagaagaaactattattgaagttgagctaaca
aacattcagaagaaatattaccgagccatccttgagaagaattttacatttctttccaaa
ggtggtggacaagctaacgtacctaaccttttaaacactatgatggaattgagaaagtgc
tgcaaccacccctatctaatcaatggtgctgaagagaaaattttggaagagtttaaagaa
acacacaatgcagagtctccagattttcagctccaggcaatgatccaggctgctggcaag
ctggtgctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgcttatc
ttttcccagatggtgcgctgcttggacatcctggaagactatctcattcagagacggtat
ccatatgaacggatcgatggtcgtgtcagaggcaatctccgccaggcagctatcgacaga
ttctccaaacctgattccgataggtttgttttcctcctgtgcacaagggcaggaggtcta
ggcattaacctcactgctgctgatacctgcatcatcttcgactcagactggaatccccag
aacgacctccaggctcaggctagatgccacagaatagggcagagcaaatctgtgaaaatc
tacaggctgattactagaaactcgtatgagagggagatgtttgacaaggcgagcttgaag
ctgggcctggataaagctgtgctgcagtcgatgagtggaagagagaacgccacgaacggg
gtgcagcagctttccaagaaggagatagaagaccttctacgcaagggagcatatggtgca
cttatggaggaggaagatgaaggctccaagttctgtgaagaggatattgaccagattctc
cttcgccgaacccacactattaccatagagtctgaaggaaaaggctccacgtttgctaag
gccagttttgttgcatctggaaataggacagacatttctttggatgacccaaatttctgg
caaaagtgggctaagaaggctgaactggacatcgatgccttaaatgggaggaacaacctg
gtgattgatactccaagagtcaggaagcagacccggctatacagtgcagtgaaggaagat
gagctgatggagttctctgacctggaaagcgattctgaagaaaagccttgcacaaagcca
cggcgcccccaggataagtcccagggctatgcccggagcgagtgcttcagggtggagaag
aatctgctagtctacggctggggccgctggacagacatcctgtcccacgggcgctacaaa
cgtcagctcgctgagcaagacgtagagaccatctgcagagccatcctggtgtactgtctc
aatcactacagaggggatgagaacatcaagagctttatctgggacctaatcacacccaca
gctgatggccagactcgagccctgctcaatcattccggtctgtcggcccctgtgccaagg
ggccggaaagggaagaaggtgaagacgcagagcacgcagccggtagtgcaggatgctgac
tggctggcaagctgcaacccagatgccctgttccaggaggacagctacaagaagcacctg
aagcatcactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctacgacaagaa
gtgataggcgaccaggcagataagatcctcgagggtgctgactcaagtgaggcggacgtg
tggatccctgagcctttccatgctgaagttcctgcagattggtgggatagggaagcagat
aaatccctcttaattggagtgttcaaacatggctatgagaagtacaattccatgcgagct
gaccctgcactgtgctttctggaacgagttggcatgcccgatgccaaggccatcgctgcc
gagcaaagagggacagacatgctagcagatggtggtgacggtggagaatttgatagagaa
gatgaagatccagaatataaaccaaccagagtgccattcaaagatgaaatagatgaattt
gccaattctcccccagaggacaaggaagaatccatggaaatacacagcacaggcaagcac
agcgagagcaatgctgagttaggtcaactttactggccgaacacgtcaaccctgacgacg
cgtctgcgccggctcattactgcctatcagcgcagctataaaaggcaacaaatgaggcaa
gaggccctaatgaagacggaccggcgcagacggagacctcgggaggaagtgagagcgctg
gaggcagaaagggaggctattatatctgagaaaaggcaaaagtggactagaagagaggaa
gctgacttttaccgtgtggtatccaccttcggggtcatttttgaccctgtgaagcagcag
tttgactggaaccaattccgcgcctttgccagactggacaaaaaatctgatgagagtttg
gagaagtacttcagctgttttgtggccatgtgcaggcgggtgtgtcgaatgcccgccaaa
cccgaggatgaacctcctgacctggcctccctcattgagcccatcaccgaggaacgagca
tctaggaccctgtaccgcattgagctgctacgcaagatccgagagcaagtcctccaccac
ccgcagctgagtgacaggctgaagctctgccagcccagcctagacctgcctgagtggtgg
gaatgtggacggcacgacagggacctgttggtgggtgctgctaagcacggggtcagccgg
acggactaccacatcctcaatgaccccgagttgtccttcctggatgcacataaaagcttt
gctcagaaccgtggggccggtaccgtctcttcgttgaatgctctggctgtgggcttcggc
caggctcctccagccatttccttggctcatgctcacgaagagaaggtaattgagcaggcg
gagggcaaggcagaggagtctgaaccctcaccggccagagagaggtcggatgggaaagag
gaggaggaggaagctggcagtggggccaaggacagcaggcaggactgtgaggctgaggcc
ggctctctgaagagtgaacccaaaggggtggaaggcagtgcagaccctgggtccaaggcc
gtctcggagaaaggctcggaagaggatgatgaagagaagctagaggacgatgataagtcg
gaggagtcgtcgcagccagaagcaggggccgtctctagaggaaagaattttgatgaggaa
agcaatgcttccatgagcaccgccagagatgaaacccgagatggattctacatggaggac
ggagatccgtcggtggctcagctccttcacgaacgcacgtttgccttttcgttctggccc
aaggacagagtaatgataaaccgattagacaacatctgtgaagctgtactgaaaggcaaa
tggccagtaaatcggcgccagatgtttgatttccagggcctcatccctggttacacgcct
tccaccatggacagtcccctgcagaagaggggctgtgccgagctctccatggtcagccag
gccagcatcagcgggagtgaggacatcaccacttctcctcagctgtccaaggatgatgcc
cttaacctgtctgtccctcgccagcggcggcggcgaaggaggaaagttgaaatagaggct
gaaagagccgccaaacggcggaatcttatggagatggtcgcccagcttcgagagtctcag
gcggcttcagagaatggacaggaaaaagttgtggacttatcaaaggcctcaagagaggca
acaagttctacctcaaagttttcatctcttacttcgaagtttatcttgcctaacgtgtct
acaccagtgtctgatgcctttaagactcagatggaactgctacaagcaggcctttcgcgc
acacccacaaggcatctgctcaacggctccctgatggatggagagccccccatgaagagg
aggcggggcaggaggaaaaacgtggagggcctcgacctgtttttcatgagccacaaacgg
acagcgttcagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagacc
ccaccaatacgaaacattccttctcctggacagctggaccctgacacacggatccctgtg
ataaaccttgaagatgggacaaggctggtgggagaagacgctcctaaaaacaaggacttg
gttgactggttgaagctgcatcctacttacactgttgatatgcccagttatgtaccaaag
aatgcagatgtgctgttttcctcctttcagaaaccgaaacagaagcgacataggtgtcgg
aatcctaacaagttggatataaacactttgacaggagaggaaagggtcccagttgttaac
aaacggaacgggaagaagatgggtggagccatggcccctccaatgaaggatctgcccagg
tggttggaagagaaccctgagtttgcggttgctcccgactggaccgatatagtcaagcag
tctggttttgttcccgagtcaatgtttgaccgtcttctcactggacctgtggtgcgggga
gaaggagccagccggagaggacggaggcccaagagcgagatcgcccgagcagccgccgcg
gcggcggctgtcgcctctacttcagggatcaaccctctgttggtgaacagcctgtttgct
gggatggacctgacaagccttcagaatctccagaacctccagtccctccagctggcaggg
ctcatgggcttccctccaggactggccacagctgccaccgccggaggcgacgcgaagaac
cctgccgctgtgctgcccctgatgctgccaggaatggcaggcctgcccaacgtgttcggc
ctgggcgggctgctcaacagccctctctcagctgctactggaaacgccactactgctgcg
caaggagagccggaggacggcccttcaaaagcggaagagaaagggaacggaaatggagac
gagaatcgagactctgagaaaagcacagacgccgtgtcggctgctgactctgcgaacgga
tctgttggtgctgctactgccccggctgcgttgccctccaacccgctggccttcaaccct
ttcctcctgtccaccatggcccccggcctcttctacccatccatgtttctacctccagga
ctggggggattgaccctgcctggcttcccagccctggcgggactccagaacgccgtgggt
gccagcgaagaaaaggctgctgacaaggctgagggaggcccctgtaaagacggagagacc
ctggaaggcagcgatgccgaggacaacctggacaagacggcagagtcctccatcttggaa
gacgaggttgcacagggtgaagagctggactccctcgaaggcggggaagagatggagaac
aacggaaatgccgagtga
DBGET
integrated database retrieval system
