Peromyscus maniculatus bairdii (prairie deer mouse): 102916520
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Entry
102916520 CDS
T11302
Symbol
Spopl
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102916520 (Spopl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102916520 (Spopl)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102916520 (Spopl)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
102916520
NCBI-ProteinID:
XP_076425451
Ensembl:
ENSPEMG00000018924
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Position
4:17509748..17579976
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AA seq
392 aa
AA seq
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MSREPTPPLLGDMSPSPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTNTNTLK
VPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECKKNR
VEINDLDPEVFKEMMRFVYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCSSLSVE
NVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaacctactccaccgctgcttggagatatgtctcctagccctgttgcagaa
agctggtgttacacacaggttaaagtggtgaaattttcctacatgtggactattaataac
ttcagtttttgtcgagaagaaatgggtgaagtgttaaagagttcaacattttcttctggc
ccaaatgataaaatgaaatggtgcctgagggtaaacccaaagggattagatgatgaaagt
aaagactatttgtccttatatttgcttttagtcagctgcccaaaaagtgaggttcgagca
aaattcaaattttcccttctgaatgctaaaagggaagaaacaaaagcaatggaaagccaa
agagcttatcgatttgtacaggggaaggactggggatttaaaaaattcattagaagagat
tttttgcttgatgaagccaatggtctcttaccagatgacaagcttacattattctgtgag
gtgagtgtggttcaagattcagtcaatgtctcaggacatacaaatacaaacactttgaag
gtgccggaatgtcgactagcagaagacttaggtaatctctgggaaaacacaagatttaca
gattgctgcttttttgtgagaggaaaagaattcaaagctcataagtctgtgcttgcagct
cgatccccagtttttaatgcaatgtttgaacatgaaatggaagaatgcaaaaagaatcga
gtggaaataaatgatttagaccctgaggtttttaaagaaatgatgagattcgtttacaca
ggaaaagcaccaaatcttgataaaatggccgacaacttgttggcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgtgaagaagctttgtgtagtagcctctcagtagaa
aatgttgctgatacccttgtccttgcagatttgcacagtgcagaacagttgaaagcccag
gcaatagactttattaataggtgcagcgtacttcgacaacttggatgtaaggatgggaaa
aactggaataacaaccaagcaactgacatcatggaaacagcagggtggaagtctatgatt
cagtctcatcctcatttagtggcagaagccttccgagcactagcatctgcacagtgtcca
cagtttggtattccacgcaaacggctaaagcagtcttga
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