Peromyscus maniculatus bairdii (prairie deer mouse): 102917299
Help
Entry
102917299 CDS
T11302
Symbol
Chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102917299 (Chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmav04040
]
102917299 (Chrnb1)
Ion channels [BR:
pmav04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102917299 (Chrnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
102917299
NCBI-ProteinID:
XP_006973494
Ensembl:
ENSPEMG00000016983
UniProt:
A0A6I9L5R6
LinkDB
All DBs
Position
8:complement(54455107..54468540)
Genome browser
AA seq
499 aa
AA seq
DB search
MTLGALLLLLGVLGAPLAPGARGSEVEGRLREKLFSGYDSSVRPAREVGDRVGVSIGLTL
AQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEYDGIESLRITDDSVWLPDVVLLNNND
GNFDVALDINVVVSFEGSVRWQPPGLYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVS
LKTGLGPDGQERQEIYIHEGTFIENGQWEIIHKPSRLIQRPGDPRGGKEGHREEVTFYLI
IRRKPLFYLVNVIAPCVLITVLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPE
TSLAVPIIVKYLMFTMVLVTVSVILSVVVLNLHHRSPHTHQMPFWVRQIFIHKLPPCLGL
KRPKPERDQLPHHTFTPTSGWGRGTDEYFIRKPPSDFLFPKLNRFQPELSAPDLRRFIDG
PTRTVGLPQELREVISSISYIARQLQEQEDHDALKEDWQFVAMVVDRLFLWTFIVFTSVG
TLVIFLDATYHLPPPEPFP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaggggcgctgctgctgcttctgggggtgctcggggcgcccctcgccccaggc
gcccgcgggtcggaagtcgaaggccgactgcgtgagaaacttttctcgggctatgacagc
tcggtgcggccggcgcgggaggtgggagaccgcgtcggggtcagcattggcctcaccctg
gcgcagctcatcagcctgaacgagaaggatgaagagatgagcacaaaggtgtacttagac
ctggagtggacggactacaggctaagctgggatcctgcagaatacgatggcatcgaatct
ctccgcatcaccgatgactctgtctggctccctgatgtggtgctgctgaacaacaatgac
ggaaattttgacgttgctctggacatcaacgtcgtggtatccttcgagggctctgtgcgc
tggcaaccccctggcctgtaccgcagcagctgcagcatccaggtcacctacttccccttt
gactggcagaactgcaccatggtatttagttcctacagctatgacagctcggaggtcagc
ctgaagacaggcctcggtcctgacgggcaggaaaggcaggaaatctacattcacgaaggg
accttcattgagaatggccaatgggagattatccacaaaccttctaggttaatccagcga
ccaggggaccccagaggagggaaggagggccatcgagaggaagtcactttctatctcatt
atccgacggaagcctctcttctacctggtcaatgtcattgccccgtgcgtcctcatcact
gtcctggccatcttcgtcttctacctccccccagacgcaggagagaagatggggctctcg
attttcgccctgctgaccctcactgtgttcctgctgctactggcagacaaagtgcctgag
acctccctggcggtccccatcattgtcaaatatctcatgtttaccatggtcctcgtcacc
gtctcagtcatcctcagcgtcgtggtcctcaacttgcaccatcgatcaccccacacccac
caaatgcccttttgggtccgccagatcttcattcacaagctccctccatgcctgggtctg
aaaaggcccaagcccgaaagagaccaactgccacatcacacttttactccaacaagtggc
tggggccgaggaactgatgaatatttcatccggaagcctccaagtgattttcttttccct
aaacttaacaggtttcagcctgaattatctgccccggacctgcgacgatttatcgatggc
ccaacccggactgttggtctgcctcaggagctacgcgaggtcatttcttcaatcagctac
atcgcccgacagctgcaggaacaggaggaccacgatgctctaaaggaggactggcagttt
gtcgccatggttgtggatcgtcttttcctgtggacattcatcgttttcacaagcgtcggg
accctggtcattttcttagatgccacgtaccatttgccccctcctgaaccttttccctga
DBGET
integrated database retrieval system
