Peromyscus maniculatus bairdii (prairie deer mouse): 102917601
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Entry
102917601 CDS
T11302
Symbol
Thoc5
Name
(RefSeq) THO complex subunit 5 isoform X1
KO
K13174
THO complex subunit 5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102917601 (Thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
102917601 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102917601 (Thoc5)
03041 Spliceosome [BR:
pmav03041
]
102917601 (Thoc5)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102917601 (Thoc5)
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102917601 (Thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
102917601
NCBI-ProteinID:
XP_076401946
Ensembl:
ENSPEMG00000009816
LinkDB
All DBs
Position
10:8215736..8251111
Genome browser
AA seq
696 aa
AA seq
DB search
MSSSESSKKRKPKVIRSDGTPTEGKRNRTDTEQEGKYYSEEAEVDLRDPGRDYELYKYTC
QELQRLMAEIQDLKSKGSKDVAMEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA
KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYTEAPPNISKAEIT
MGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQA
SLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLS
VAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLS
VLIDLKCKDNSVLHLTFYYLMNLNIMTVKAKVTTTVELITPISAGDLLSPDSVLSCLYPG
DHGKKTPNPANQYQFDKVGILTLRDYVLELGHPYLWVQKLGGLHFPKEQPQHTVVADHSQ
SASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQSLFPAKVVSRLVKWVIIAH
EDYMELHFTKDIVEAGLAGDTNLYYLALIERGTAKLQAAVVLNPGYSSIPPIFRLCLNWK
GEKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVE
GPKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcagaatccagcaaaaaaaggaaacccaaggtgatccgaagcgacggaacc
ccaactgaggggaaacggaaccgaactgatactgagcaggaaggcaaatactacagtgag
gaggctgaggttgacctgcgggaccctggcagagactatgagctgtacaagtacacttgc
caggagctgcaaaggttgatggccgagatccaggacctgaagagcaagggcagcaaggat
gtggccatggaaattgaagagcgaaggatccagagctgtgtgcatttcatgactctaaag
aagctaaaccgcttagcccatatccggctaaagaaaggaagagatcagacccatgaggcc
aagcagaaagttgatgcctaccacctgcagcttcagaacctgctctacgaagtgatgcac
ctgcagaaggagatcaccaaatgtctggagttcaagtcaaagcatgaagaaatcgatctg
gtcagtttagaggaattttatacagaggctccacccaacatcagcaaggccgaaatcacc
atgggagaccctcaccaacagaccttggcccgtctggactgggagctggagcagaggaag
aggctggcagagaagtaccgagaatgtctctccaacaaggagaagatcctgaaggagatt
gaggtgaagaaggagtatctgagcagcctgcagcctcgtctcaacagcatcatgcaggct
tccctcccggtgcaggaatacctgttcatgccctttgaccaggctcacaagcaatatgag
acagccaggcacctgccgcctcccctctacgtgctcttcgtgcaggccactgcgtacggg
caggcctgcgctcatatgaaatcctcctcccagccccctagacaggataagacgctgtcg
gtggccattgaaggcagtgtggacgaggccaaagctctcttcaagccccctgaggactct
caagatgatgagagcgactcggacgctgaagaggagcagactacgaaacggcgtcgaccc
acacttggggttcagttggatgataagcgcaaggagatgctgaaaaggcacccactgtcc
gtcttgattgatctgaagtgcaaagacaacagtgtgcttcatctgactttctactatctc
atgaacctcaacatcatgaccgtgaaggccaaagtgacgaccaccgtggagctcatcacc
cccatcagtgcaggagacttgctgtctcccgactcggtcctgagctgtttgtatcctgga
gatcatggaaagaaaactccaaacccagccaatcagtatcagtttgataaagttggcatc
ctgactttgagagactatgtacttgagttaggtcacccctacttgtgggtacagaagctg
ggtggcctccacttccccaaagagcagccccagcacacagtagtggctgaccactcccag
agcgccagccacatggagaccaccatgaagctgctgaaaaccagggtccagtcccgcctg
gctctccacaaacagttcgcatctttggaacatggcatcgtgccggttaccagtgattgc
cagtccctcttccctgccaaggtggtttctcgcctggtgaagtgggtgataattgcacac
gaagattacatggagctgcatttcactaaggacatagtagaggcaggactggccggggac
accaatctctactacctggcgcttattgaaaggggaacagcgaaactccaggctgctgtc
gtattgaaccctggctactcctccatcccacccattttccgactctgtctaaactggaaa
ggggagaaaaccaacagcaatgatgacaatatccgggcgatggagagtgaggtcaacgtg
tgctataaggagctgtgtggtcctcggcccagccaccagctcttgaccaaccagctgcag
aggctgtgtgtgctgctggatgtctacctggagaccgagagccatgacgacagtgtggag
ggccccaaggagtttccccaggagaagatgtgcctgcggctttttaggggtccaagcagg
atgaagccatttaaatataatcacccacaaggattctttagccaccggtga
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integrated database retrieval system
