Peromyscus maniculatus bairdii (prairie deer mouse): 102917612
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Entry
102917612 CDS
T11302
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X3
KO
K16578
CLIP-associating protein 1/2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102917612 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102917612 (Clasp1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102917612 (Clasp1)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
102917612 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT_GCN1
HEAT
HEAT_MROH2B_C
HEAT_EZ
TOR1L1_N
TPR_CAND1
Sec7-like_HUS
Cnd1
HEAT_2
VPS15-like_hel
RTP1_C1
Ltn1_1st
TPR_DNAAF5
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
102917612
NCBI-ProteinID:
XP_042113906
Ensembl:
ENSPEMG00000001550
LinkDB
All DBs
Position
11:complement(8278208..8509579)
Genome browser
AA seq
1507 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTSRRLVSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKMRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPSDS
RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGSSRGPPVTLSSEKRSK
IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLDRFGLG
QSGRIPGSVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDA
SSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSR
VELKRLCEIFTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL
GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG
ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTE
NLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGG
GEVEGGRMALDNKTSLLNTQPPRAFPGQRAREYNPYPYSDSINTYDKTALKEAVFDDDME
QLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLL
LETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAA
STLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQ
GYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSS
SDVSTHS
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgaatggagtcctgtctggcccaggtgctgcagaaggacgtggggaaacgg
ctgcaggttggccaggaactcatagactatttctcagacaagcagaagtctgccgacctt
gagcacgaccagaccatgttagataagcttgtggacggactcgctacctcttgggtgaac
tctagcaattacaaggtggttctcctgggcatggacatcctgtctgcgctggtgacgagg
ctgcaggaccggttcaaggcgcaaatcggcaccgtgttgccaagtctaatagacagactg
ggagatgctaaggactccgtgagggagcaagaccagaccctgctgctaaagatcatggat
caagctgctaacccccagtacgtgtgggacagaatgctcggaggcttcaaacacaagaac
ttccgcacgagagagggcatctgcctctgccttattgcaacactcaatgcctctggggcc
cagacgctaacactaagcaagattgtgccacatatatgtaacttactaggagatcccaac
agccaggttagagatgcagcaataaacagtctggtggagatttacagacatgtaggcgaa
cgtgtgagggcagacctcagtaagaaagggctgccacagtcccggttgaatgtcattttt
acaaaatttgatgaagtccaaaagtctggaaatatgatacagtctgcaaatgataaaaat
tttgatgacgaggattctgtggacggaaataggccttcctctgccagctcctcatcatcc
aaggctccatctagttcccggaggaatgttagcatggggaccagccgccggctcgtgtcg
tccagtcttggatctaagtcctcagctgcaaaagaaggtgctggtgctgtggatgaagag
gattttattaaagcctttgacgatgttcctgtagtgcagatttactctagccgagacctc
gaggaatccataaacaaaattagagaaatcctgtcagacgacaagcatgactgggagcag
agagtgaacgctctaaaaaagatgaggtcgttgcttttggctggggctgctgagtacgat
aacttctttcaacacttgcgtcttctggatggagcctttaaactctctgccaaagacctg
cggtctcaggtagtgcgggaagcttgcatcacattggggcatctgtcatcagttctggga
aataagtttgatcatggagctgaagccattatgccaactatctttaatttaatcccaaac
agtgccaaaattatggctacttctggtgttgtagctgtgaggctaatcattcggcacacg
cacatccctcggctaatccctgtcataacaagcaactgtacctctaagtctgtcgcagtt
agaaggcgctgttttgaatttttagatttacttttacaagaatggcagacacattcacta
gaaagacacatatcagtattagcggaaacaataaagaaaggaatacatgatgctgattct
gaagccagaatagaagccagaaagtgctactggggtttccacagtcacttcagccgagaa
gcagagcacttgtatcacactctagagtcctcctaccagaaagccttgcaatcccacttg
aagaactcggacagcatcgtgtctctgcctcagtcggaccgatcttcctccagctctcaa
gagagtctcaaccggcccctttctgccaagagaagtcccaccggcagcaccacgtccaga
ggctccacagttagtaccaaatctgtgtcaacgacaggatccctccagcggtctcgaagt
gacatcgacgtgaacgcagccgccagtgccaaatccaaagtctcctcatcctcaggctcc
accgccttcagctctgcggcagcgctgcccccagggtcctatgcatctttaggtcggatc
cgcacaagacggcaaagctcggggagtaccaccaatgttgcctccacaccctcggacagt
cggggccgcagtcgcgccaaagtggtttcccagtctcagcgatccagatctgctaacccc
gctggtgctggcagccggtcgagttcccccgggaagctgctgggcagtggctatggcgga
cttgctgggggttcctcaagagggccacctgtaacactgtcttcagaaaaacggagcaaa
atccccaggagtcagggatgcagccgagaaacaagtcctaaccggataggattagcacgg
agcagccgtatcccccgacccagcatgagtcaggggtgcagccgcgataccagccgtgag
agcagccgcgatacaagccctgctcggggcttcgctccactcgatcggtttgggctgggc
cagtcgggaaggatccctggttccgtgaatgccatgcgagttttgagcaccagcacagac
ctggaagccgccgtggccgacgcgctgctgttaggagacgccaggagcaagaagaagcct
gtgaggaggaggtacgagccctatgggatgtattctgacgatgacgccaacagtgacgcc
tccagtgtgtgctctgagcgctcgtacggctccaggaatggtggcattcctcattatctg
cggcagactgaggacgtagcggaagttctcaaccactgcgctagttccaactggtcggaa
aggaaagaggggctcctgggcctgcagaacttactgaagagccaaagaacactgagtcga
gtagaattgaagagattgtgtgagattttcacccgaatgtttgctgaccctcacagcaag
gttttcagtatgtttttggagaccctcgtggattttataatcattcataaggatgacttg
caagactggcttttcgtcctcctcacacagttacttaagaaaatgggagcagacttactt
ggatctgtgcaagcgaaagttcagaaagcactggatgtcaccagggactctttcccattt
gatcaacaatttaacattttgatgagatttattgtggatcagacgcaaactccaaacctc
aaggtcaaagtcgcaatcctgaaatacatcgagtctctggccaggcagatggaccccaca
gattttgtaaactccagcgaaacaaggcttgctgtttctagaatcataacgtggactaca
gaaccaaagagttcagacgtgagaaaggcagcacagattgtgcttatctctctgtttgaa
ttgaacacacctgaatttaccatgttacttggtgccttgccaaaaacattccaggatggt
gccaccaaactcctgcataaccacctcaagaactccagtaacaccagtgtgggatctcca
agcaatacaattggccggacgccttcccgacaccccagcagcaggaccagccccctgacc
tcacccaccaactgttcccatgggggactatctccaagcatgctggactatgatacagag
aacctgaactctgaagaaatctacagctctttgcgtggagttacagaagccattgaaaag
ttcagcttccgaagccaagaggacctgaatgagccaattaagcgagatggcaagaaggac
tgcgatatcgtgtcccgagacggaggagcagcctcacctgccaccgaaggccggggaggt
ggtgaggtagaaggaggcaggatggctttggacaacaagacctccctgctcaacacgcag
cctccacgtgccttcccggggcagcgggcacgggagtataacccgtatccctactcagac
tccatcaacacctatgacaagacggctctgaaggaggcggtgtttgacgatgacatggag
cagctccgagatgtgcccattgaccactcggacctggtggctgacttgctgaaagagcta
tctaaccacaatgagcgtgtggaggagcggaagggagccctgctggagctgctcaagatc
accagggaggacagcctgggcgtgtgggaggagcacttcaagaccatcctgctgctgctg
ctcgaaactctaggggacaaggatcattccattcgagctctggcactgagagttttacgg
gagattctgagaaaccagccagcaagattcaaaaactacgcagaactgacgatcatgaag
acgctggaagcccacaaagactcccacaaagaggtggtaagagctgctgaggaagctgca
tccacgctagccagctccatccacccggagcagtgcatcaaagtgctgtgcccgatcatc
cagacggccgactaccccatcaacctggccgccatcaagatgcagacgaaagtggtggag
aggatcaccaaggagtccttgctgcagctccttgtcgacatcatcccaggcctgctgcag
ggttacgacaacaccgagagcagtgtacggaaggccagcgtgttttgcttagtggcaatc
tattccgtaatcggagaagatctgaaacctcaccttgcacagctcacggggagcaagatg
aagttgctgaacttatacataaagagggcccagaccaccaacagcaacagcagctcctcc
tctgatgtgtccacacacagctag
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integrated database retrieval system
