Peromyscus maniculatus bairdii (prairie deer mouse): 102917792
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Entry
102917792 CDS
T11302
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102917792 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102917792 (Smarcad1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102917792 (Smarcad1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
HHH_3
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
102917792
NCBI-ProteinID:
XP_042129356
UniProt:
A0A8C8VRZ9
LinkDB
All DBs
Position
3:86566365..86639463
Genome browser
AA seq
1021 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEASPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDVT
EKTEDSSVPEPPDNERKGSLSCFQSQRGIQYIDLSSDSEDASPNCSSTVQEKKFNKDTVI
IVSEPSEDEESHDLPSVTQRNDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKLIE
STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEAYEEEEDDQSLKKPRVDRGEESNESAE
ASSSWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQSASQS
EVTNGKEVAKNQNYSKNAAKTKMKQKISMKPQNGFNKKRKKNAFNPKKATEDSEYDSGSD
VGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIAELTLIPQCSQKKAQRITELRPFNSWE
TLFTKMSKINGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNI
EQPSILNQSLSLKPYQKVGLNWLALVHKQGLNGILADEMGLGKTIQAIAFLAYLFQEGNK
GPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYN
CAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLL
ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPVDEQSIYEKERIAHAKQIIKPFILRRVKE
EVLKQLPPKKDQIELCAMSEKQEQLYWGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHP
LLHRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNYQL
DMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQ
ISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHR
VGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEADEGNMPADIATLLKTSMG
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggaataagattgaggaagct
cccgaagcatcccctcagccctcccagcctggtccttcatcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacacgccagactcagatgtaact
gaaaaaacagaagattctagtgttccagaacctccagacaatgaaagaaaaggaagctta
tcatgtttccaaagtcaaagaggaatacagtatattgatttgtcttctgatagtgaagat
gcttctccaaattgttccagtacagttcaagagaaaaaattcaacaaagacacagtcatt
atagtttcagagccatctgaagatgaagagtcccatgaccttccttctgttacacaaaga
aatgacatttcagaactggaagacctttcagaattggaagatcttaaagatgctaagctt
cagacgttgaaggaactttttccacaaagaagtgacaatgatctcctaaagttgattgaa
tcaacaagcactatggatggagccattgctgctgccttgctgatgtttggtgatgcaggt
ggtggacccagaaaaagaaaattatcttcttcttctgaggcatacgaggaggaggaggat
gatcagtctttaaaaaagcctcgagtggatcgtggagaagaatcaaatgagtctgcagaa
gctagcagcagctgggagaagcaggaaagtattgtattaaaattgcaaaaggaatttcca
aactttgataaacaggaactcagagaagtgctcaaggagcatgaatggatgtatacagaa
gccttggagtctctcaaagtgtttgcagaagatcaagatatgcagtctgcttcacaaagt
gaggttacaaatggaaaagaagttgcaaagaatcaaaattattctaaaaatgcagctaaa
acaaaaatgaaacagaaaatttctatgaaaccacaaaatggatttaacaagaaacgtaag
aaaaatgcatttaatcctaagaaagccacagaagactctgagtacgattcaggttctgat
gtcgggagctccctggatgaggactacagcagtggtgaagaagtgatggaggatggctat
aaaggcaaaattctccacttccttcaagatgcttcaattgctgaactgactttaattcct
cagtgttctcagaaaaaggctcagagaataacagaactccggccctttaatagttgggaa
actctgtttacaaagatgtccaaaatcaatggcctatctgaagatttgatatggaattgt
aaaacgctaattcaagaaagggatgtagttataagacttatgaacaaatgtgaagacatt
tcaaataaattgaccaaacaagtgaccatgctcaccggaaatggaggcggatggaatata
gagcagccctccattctaaaccaaagtttgtccctcaagccctatcagaaggttggtttg
aactggctggcactggtgcataaacaaggtctcaatggcattttggcagatgaaatgggc
ctaggaaaaaccattcaagccattgcattcctggcatacctcttccaggagggtaataaa
gggcctcatttgattgttgttccagcctccaccatagataactggctaagagaagttaac
ttatggtgtcctactttaaatgtgctctgttactatggttctcaagaagagcgtaaacaa
attagattcaacatccataataaatatgaagattacaatgtaattgttacaacgtataat
tgtgcaatcagcagctctgatgatcgcagtctctttcgacggctgaaattgaattatgca
attttcgatgaaggccatatgctgaagaatatgggctctatccgataccagcacctaatg
acaattaatgccaataaccgtttactgctcacgggtacacctgtgcagaataatctgcta
gaactcatgtcattgctgaattttgttatgccacacatgtttagtagcagcaccagtgag
atccgaaggatgttttcatctaaaacgaaaccagtagatgagcagagcatctacgagaag
gagagaatagcacacgcaaagcaaatcataaagccctttattctcagaagagtgaaggag
gaggttctcaagcagctgcctcctaagaaggatcagattgagctgtgtgcaatgtcagag
aagcaggagcagctgtactggggccttttcaatagactgaagaagtccatcaacaaccta
gaaaaaaacacagaaatgtgcaatgtcatgatgcaattgaggaaaatggccaatcaccct
ttgttacatcgtcagtattatacacctgagaagctgaaggagatgtctcagctaatgctg
aaggaacctacacattgtgaggctaaccctgacctgatctttgaagacatggaagttatg
acagactttgaactacatgtactttgtaaacagtatcgacacattaataattaccagtta
gacatggatttgatcttagattctgggaaattccgagccttaggatgcatcttgtctgag
ttgaaacagaagggtgatagagttgtattattcagccagttcaccatgatgctggatata
ttagaggttctcttaaagcatcatcaacataggtacctccgattagatggaaagactcag
atttcagaaaggattcatctaattgatgagtttaatacagatatggatatctttgtattt
ctcttgtcaaccaaagctggtggattaggaataaatctgacttcagcaaatgtcgtcata
cttcatgacattgattgcaatccatacaatgacaaacaagcagaagacaggtgccataga
gttgggcagactaaagaagtattagttattaaattaataagccaaggaaccattgaagag
tccatgctaaaaattaaccaacagaagttgaaactagaacaagatatgaccacaatagat
gaagctgatgaagggaatatgccagcagatatagccacattactaaaaacgtcaatgggc
ctgtga
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integrated database retrieval system
