Peromyscus maniculatus bairdii (prairie deer mouse): 102918039
Help
Entry
102918039 CDS
T11302
Symbol
Btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmav03021
]
102918039 (Btaf1)
Transcription machinery [BR:
pmav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102918039 (Btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
ARM_ECM29
UTP20
Motif
Other DBs
NCBI-GeneID:
102918039
NCBI-ProteinID:
XP_076418949
Ensembl:
ENSPEMG00000005174
LinkDB
All DBs
Position
1:189180828..189271732
Genome browser
AA seq
1848 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGS
AGAEFEVQDEKPGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSA
ALVNKPSTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGE
PEEKRRKVANVVVNQTANDSKVLIDNVPESSSLIEETNEWPLESFCEELCNDLFNPSWEV
RHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSD
EVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPSIINTLWDSLL
ELDDLTASTNSIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETL
FTLLSTQDQNSSSWLIPILSDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVA
AACPWMGAWLCLMMQPSHLPIDLNMLLEVKAKAKEKTGGKVRQGQIQNKEVLQEYIAGAD
TVMEDPATRDFVVMRARMTAAKLLGALCCCICDPGVNMVNQEIRPAESLGQLLLFHLNSK
SALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQF
ISSLADAHIEVGNRINNNVLTIDQANDLVTTVFNEVTSAFDLNPQVLQQLESKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCI
AKLLQQCTTRSPCPNSKVIKNLCSSLCVDPYLTPCVPCPVPTQSGQENSKGSNSEKDGMH
HTVTKHRGIITLYRHQKAAFAITSRRGPIPKAIKAQIADLPAGSSGNVLVELDEGQKPYL
VQRRGAEFALTTIVKHFGAEMAVKLPHLWDAMVGPLKTMIDLNNFDGKSLLERGDGPAQE
LVNSLQVFEIAAASMDSALHPLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIATMET
MNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDS
VRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQMKAKERHFLEQLLDGKKLENYKIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYARSKL
AECMPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERIRLQHQVKRHNLIVA
SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL
ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL
RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKPK
LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQ
LLLDCGLGNGSTSDSGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD
KDGKAEKADSSTSGKASMKSVLDNLSDLWDAEQYDSEYNLETFMRSLE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagacttgatcgtctttttatcttattggatactggtactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtagtgaagcttcatcctcatgaacta
aataatttgttatctaaggtattaatatacttaaggagtgcaaattgggatacccgaatt
gctgcaggacaagctgttgaagctatagtgaaaaatgtgcccgagtggaatccagtgcca
agaaccaaacaagaacctacagaaagttctatggaagattcatctactacagatcgatta
aattttgacagatttgatatatgcagattgttacagcatggtgcatcacttttggggtct
gctggtgcagaatttgaagtccaagatgaaaaaccaggtgaagtagatcctaaagagaga
atagcacgccaacggaaattattacagaagaagcttggacttaatatgggggaagcaatt
ggaatgagtactgaagagctcttcaacgacgaggatttggattacaccccaacttcagca
gcccttgtaaacaaaccatctactctccaggctgctgaattgatagattcagaattccga
gcaggaatgagtaatagacagaagaacaaagctaaaagaatggccaagttatttgcaaaa
cagagatccagggatgcagtggaaacgaatgagaagagcaatgatagcactgatggagag
ccagaagaaaagagacggaaagtagcaaatgttgttgttaaccagactgcaaatgattcc
aaagtcttgattgataatgttccagaaagttcttctttaattgaggagacaaacgaatgg
cctttggaaagcttctgtgaagaactttgcaatgacctttttaatccctcctgggaggtt
cgacacggggcaggtactggacttagagaaattcttaaagctcatgggaaaagtggtggt
aaaatgggagacagcactttagaagagatgattcagcagcatcaagagtggttagaggac
ttagtcattcggctcctttgtgtttttgccttggacagatttggagactttgtttctgat
gaagttgtagcaccagtccgtgaaacttgtgctcaaacattaggtgtggttttaaagcac
atgaacgaaacaggagttcataagacagtggatgtgctgctgaagttactgacccaagaa
cagtgggaagttagacacggcggtctgctggggatcaagtatgctctggcggttcgtcag
gatgtaattaatactttattgcctaaagttttaactcgaataattgaaggactccaggac
cttgatgacgacgtcagagctgttgctgcagcatccttagtgcctgtagtagaaagcctt
gtctaccttcagacacaaaaggtaccctccattataaataccttatgggattctctcctg
gaattagatgatctaacagcttcaacaaatagtattatgactcttctttcatccatgtta
acttaccctcaggtccagcaatgcagtattcagcagtcacttacagttttagttccccgt
gtctggccatttttgcatcacactatatcttcagttcgaagagcagcattggaaactctc
tttacattgttatcaacacaggaccagaactcttcatcttggcttatacccatcctgtct
gatatgctgcgacacatttttcagttttgtgttttagaaagcagccaggaaattctggat
cttattcacaaggtttggatggaactgttgagcaaggcttccgttcagtatgtggtagca
gctgcttgcccatggatgggtgcttggctttgcttaatgatgcagccttctcatttacct
attgacttaaatatgttgctagaagtaaaagctaaagccaaggaaaaaacaggtggtaag
gtacggcaaggccaaatccagaataaagaagtgcttcaggagtatattgcaggtgcagac
acagtcatggaagacccagctaccagggattttgtagttatgagggccaggatgacggca
gctaagttgttaggagcactttgttgctgtatttgtgatccaggtgtaaatatggtaaac
caagaaattagaccagcagaatctcttggccagttacttctgttccatctgaactccaaa
tctgctttacagagaattagtgttgcattagtaatctgcgaatgggctgctttacaaaag
gagtgtaaagctgttaccctagctgtgcagccacgtttgcttgatatcctttcagaacat
ttgtattacgatgaaattgctgttccattcacacgaatgcagaatgaatgtaaacagttt
atatcatcattagctgatgcacatattgaagttggtaatagaataaacaacaatgtttta
acaatagatcaagctaatgacctggtaactactgtttttaatgaagtcacatcagctttt
gatttaaatcctcaagtgttacagcagttagagagtaaacgacatcaggtccaaatgaca
gttgcagagaccaaccaagagtggcaagtgttgcagttgagagtgcatacttttgctgca
tgtgcagttgtcagcttgcagcagcttccagagaaattaaatcctatcataaaaccacta
atggaaacaattaaaaaagaagagaatacgctcgtccagaactatgccgctcagtgcata
gctaagcttcttcagcagtgtacaacaagatcaccatgtccaaattcaaaagttattaaa
aacctctgtagctctctgtgtgtggacccgtacctcactccctgtgtaccatgtccagtg
ccaacacagagtggccaggagaattctaaaggatccaactcagaaaaagatggaatgcac
catactgtcactaagcacagaggtatcattacactgtataggcatcagaaagcagctttt
gctattacaagcaggcgaggtcctatccccaaagcaatcaaagctcagatagcagatctg
cctgcaggaagtagtgggaatgtcctggttgaacttgatgagggtcagaagccttacctg
gtacagcggagaggagctgaatttgccctaacaactatagtaaagcattttggtgctgaa
atggcagtgaagttgccacatctttgggatgctatggttggcccattgaagactatgatt
gacctaaataattttgatggaaagtccctcctggaaagaggtgatggtcctgctcaagaa
ttggtgaattctctgcaagtttttgaaatagcagcagcttcaatggattctgcacttcat
cccttgctggtacagcatttgccacatctgtacatgtgcctgcagtatcccagcaccgca
gtgaggcacatggcagctcgctgcataggggtcatgagcaaaatagctaccatggaaacg
atgaacatttttttagagaaggtgcttccgtggctgggagcgattgacgacaatgtcaaa
caagaaggtgcaattgaagcacttgcctgtgttatggaacagttggatgttggtattgtt
ccatatattgtccttctagttgttcctgttttgggaagaatgagtgatcagacagacagt
gtgagattcatggctactcaatgcttcgcaacactaattagactgatgccacttgaggca
ggcattccagaccctccaaacatgtcagaagaattaattcagatgaaggcaaaagagcga
cactttttagagcaattattagatgggaagaagttagaaaattacaaaatcccagtacca
atcaatgctgaactaagaaagtatcaacaggatggtgtcaactggttagcatttcttaat
aaatataagcttcatggaattctgtgtgatgacatgggcttaggaaaaacattacagtcc
atctgcattctagcaggagatcattgtcagagggcccaggaatatgcaagatcgaaattg
gcagaatgcatgccccttccttccttggtggtttgtccaccaacgttaacaggccattgg
gtagatgaagtaggtaaattttgctccaaagaatatctcaatccactgcattatactggc
cctcccactgaaaggataaggttacagcatcaagtaaaaaggcataatctgatagtagct
tcatatgatgttgtgaggaatgacatagacttttttagaaatattaaatttaactactgt
attcttgatgaaggccatgtcataaaaaatggaaaaaccaaattgtccaaagcagtaaaa
caactgactgctaactataggatcattctttccggaacaccaatccagaacaacgttttg
gagttgtggtcattatttgatttccttatgcctggatttttgggtactgaacgccagttt
gctgctcgatatggtaaacctatactagcaagtagggatgcacggagctccagtcgagaa
caagaagccggtgttctcgcaatggatgcactgcaccgccaagtcctgccgttcctcttg
agaagaatgaaagaagatgtcttgcaggatcttccacctaaaattattcaagactattac
tgtactcttagccctctccaggttcagctttatgaagattttgcaaagtctcgtgccaag
tgtgatgttgatgagaccgtgtcttcagctgccctttcagaagaaactgaaaaaccaaag
cttaaagctacaggtcatgtattccaggcattacaatatttacgtaaactgtgcaaccat
ccagcattggtcttaacccctcagcatccagaattcaagagtactactgaaaaactggca
gttcagaattcttcccttcatgatattcaacatgcccctaaactctcagctttgaaacag
ttgctattggactgtggtttgggaaatggcagcacttcggacagtggcacagagtctgtg
gtggcccagcacagaatactgatcttctgccagcttaaaagcatgcttgatatagtggaa
catgacctgctaaagcctcacctgccctctgtcacctacctgaggctagatggcagcata
cctcctggacagaggcattccatcgtttccaggtttaacaatgacccatccattgatgtt
cttttacttacaactcatgttggtggcctagggcttaacctgactggtgctgacactgtg
gtgtttgtggagcatgactggaaccctatgcgagatctacaggccatggaccgggcccat
cgtatcgggcagaaacgtgtggttaatgtctaccggctgataaccagagggacactggaa
gagaagataatgggcttgcagaaattcaagatgaacatcgcaaataccgttatcagccaa
gagaattctagtctacagagcatggggactgaccagcttcttgacttgtttactctggat
aaggatggcaaggcggaaaaggccgacagctccacttctggaaaagcgagcatgaaatca
gttcttgacaacctgagtgacctctgggatgccgagcagtatgattctgagtacaacctg
gagaccttcatgcgttctctcgagtaa
DBGET
integrated database retrieval system
