Peromyscus maniculatus bairdii (prairie deer mouse): 102918519
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Entry
102918519 CDS
T11302
Symbol
Trim50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102918519 (Trim50)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102918519 (Trim50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-RING_4
zf-Nse
Sina_RING
zf_RING_Vps8_fungal
zf-RING_6
zf-RING_10
TRIM_CC
Baculo_IE-1
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102918519
NCBI-ProteinID:
XP_006971354
Ensembl:
ENSPEMG00000010927
UniProt:
A0A6I9L174
LinkDB
All DBs
Position
23:27009416..27025770
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AA seq
484 aa
AA seq
DB search
MAWRAAVPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDSLSQHLDSELRCPVCRQWV
DYSNSPPNVSLARVIDALRLPGDAEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAGRISELKEEQRKVEEHIGKLVNNRTRIINESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVEGHTRGLVASLDMQLEQAQGTQERLTQAEQVLEQFGNESHHEF
IRKFHTIASRAEVQQARPLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASKGFSWGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLSKSPEHGVWLIGLKEGRVYEAFGCPRLPLPVAGHPHRIGVYLHY
EHGELTFFDADRPDDLRILYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGHLT
PVQL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcgcgcggccgtgccggagctacaggaccaactacagtgccccatttgcctg
gaggtcttcaaggagcctctgatgctacagtgcggccactcctactgcaaagactgcctg
gactccttgtcccaacacctggactccgagctgcgctgtcccgtgtgtcgtcagtgggta
gactacagcaactccccacctaatgtctccttggcacgggtgatcgatgccctgaggctc
ccgggggacgcagagcccaccgtttgcgtccaccaccggaaccctctcagcctcttctgc
gagaaagaccaggagttcatctgtggtctctgcggcctgctgggctcccaccaacaccac
cgagtcacaccagtctccaccgtctacagccgcatgaaggaagaactcgcaggccgcata
tctgagctgaaggaggagcagaggaaagtggaggaacacattggcaaactggtgaacaac
aggacccggattattaatgagtccgatgtcttcagctgggtgatccgcagagagttccag
gagctgcatcacctggtggatgaagagaaagcccgctgcctggagggggtagagggtcac
acacgtggcctggtggcctccctggacatgcagctggagcaagcccagggtactcaggag
cgactgacccaggctgagcaggtgctggagcagttcggtaatgagagtcaccatgagttc
atccggaagttccacaccatagcctccagggcagaggtccagcaggcccggcctttggaa
ggcgcgttcagcccgatatccttcaagccaggtctccaccaggccgacatcaaactgacg
gtgtggaagagactcttccggaaagttctgccagctccagaatctctcaagctggatcca
gctactgcccaccctctcctggaactctccaaaggcaacacagtggtacagtgtggcctc
ctcgcccagagacgggccagccagcctgagcgcttcgactacagcacctgtgtcctggcc
agcaagggcttctcgtggggtcgccactactgggaggtggtggtgggtagcaagagcgac
tggcgcctgggagtcatcaagggcacagccagccgcaagggcaagctgagcaagtcccca
gagcatggcgtatggctgataggcctgaaagagggccgcgtgtatgaggcttttggctgc
ccaaggctgccgctgcctgtggccggccatccccatcgcataggcgtctacttacactat
gagcacggggaactcactttcttcgacgccgaccgccccgatgacctgcggatactctac
accttccaggctgacttccagggcaagctgtaccccatcctggacacgtgctggcatgag
aggggcagtaactcactgcccatggtactgcccccacccagtgggcctggacacctcaca
cccgtacagctatag
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integrated database retrieval system
