Peromyscus maniculatus bairdii (prairie deer mouse): 102918543
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Entry
102918543 CDS
T11302
Symbol
Scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102918543 (Scfd1)
Membrane trafficking [BR:
pmav04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
102918543 (Scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102918543 (Scfd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Strep_SA_rep
cwf21
Motif
Other DBs
NCBI-GeneID:
102918543
NCBI-ProteinID:
XP_006975324
Ensembl:
ENSPEMG00000013333
UniProt:
A0A6I9L1M3
LinkDB
All DBs
Position
14:complement(19265129..19350054)
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AA seq
639 aa
AA seq
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MVGSKMAASASIRERQTVALRRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVK
ELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAIS
RSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITD
TEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTG
DPLGTGQLSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGVENS
PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG
LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE
YEEKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEADLEQYKKALADA
GCNLNPLQYIKQWKAFAKMASTPASCGSTTAKPMGLLSRVMNTGSQFVMEGVKNLVLKQQ
NLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKNPFQEAIVFVVGGGNYIE
YQNLVDYIKAKQGKHILYGCSELFNATQFIKQLSQLGQK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagcaagatggcggcaagtgccagcatccgggagaggcaaacagtggccctg
agacgtatgttgaatttcaatgtgcctcatgttaaaaacagcactggagaaccagtatgg
aaggtactcatttatgacagatttggccaagatatcatctctcctctgctgtctgtgaag
gagctaagagacatggggatcaccctgcatcttcttctgcactcagaccgagacccaatt
ccagatgttcctgctgtgtactttgtgatgccaaccgaagaaaatattgacagaatgtgc
caggatcttcgaaatcagctctacgaatcctattacttaaattttatttctgcgatttca
agaagtaaactggaagatattgcaaatgcagcgttggctgccagtgcggtgacacaggtt
gccaaggtttttgaccagtatctcaattttattactttggaagatgacatgtttgtctta
tgtaatcaaaataaggagcttgtttcgtatcgtgctattaatcggccagatatcacagac
acagaaatggaaactgttatggacactattgttgacagcctcttctgcttttttgttaca
ttaggtgctgttcccatcatccgctgctcaagaggaacggccgcagaaatggtggcagtg
aaactagataagaaacttcgggaaaatctacgagatgcaagaaacagcctttttacaggt
gacccacttgggactggccagttaagcttccaaaggcccttattagtccttgtcgacaga
aacatcgatttggcgacgcccttacaccacacgtggacataccaagcgctggtacatgat
gtgctggacttccacttaaacagagtaaatttggaagaatctacaggagtggaaaattcc
ccagctggtgctagaccaaagaggaaaaacaagaagtcttacgatttaactccagttgat
aagttttggcagaaacataaaggaagtccgttcccagaagtcgcagaatcagtccagcaa
gagctagaatcctaccgagcccaagaagatgaggtgaaacgtctgaagagcatcatggga
ctagaaggcgaggacgagggagccatcagcatgctttctgataacacggctaagctcacg
tcggcagtcagttctttgccagaactccttgaaaaaaaaagacttattgatctccataca
aatgttgccactgctgttttagaacacataaaggctagaaaactggatgtatattttgaa
tatgaagaaaaaataatgagcaagactactctggataagtctctcctagatgtcatatcc
gaccctgatgcgggaaccccagaagacaaaatgaggctgtttcttatctattacataagc
gcccagcaagccccttctgaggctgacttggagcagtataaaaaggctttagcggatgca
gggtgcaacctgaaccctttacagtacatcaagcagtggaaggcttttgccaagatggcc
tccactcccgccagctgcggcagcaccacggctaaacccatgggtctcttatctcgagtc
atgaatacagggtcacagtttgtgatggaaggcgtgaagaacctggtattgaagcaacag
aatctacccgttactcgaattttagacaatctcatggagatgaagtcgaatcctgaaaca
gatgattatagatattttgatcccaaaatgctgcggagcaatgacagctcagttcctagg
aacaaaaatccattccaagaggccattgtctttgtggtaggaggaggcaactacattgaa
tatcagaatcttgttgactacatcaaggcaaagcaaggcaaacatattttatatggctgc
agtgagcttttcaatgccacacagttcataaagcagctgtcacaacttggacaaaaataa
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