Peromyscus maniculatus bairdii (prairie deer mouse): 102918674
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Entry
102918674 CDS
T11302
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X6
KO
K08532
RAR-related orphan receptor alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04659
Th17 cell differentiation
pmav04710
Circadian rhythm
pmav05017
Spinocerebellar ataxia
pmav05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102918674 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
102918674 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
102918674 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102918674 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102918674 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmav03310
]
102918674 (Rora)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102918674 (Rora)
Nuclear receptors [BR:
pmav03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102918674 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102918674
NCBI-ProteinID:
XP_006979354
Ensembl:
ENSPEMG00000021178
UniProt:
A0A6I9LIL6
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All DBs
Position
7:66173929..66909416
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AA seq
467 aa
AA seq
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MYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQP
GEAEPLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDI
NGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQ
QITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLL
KAGSLEVVFIRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCEDFISFVFEFGKSLCSMHLT
EDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVST
LRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatctgt
ggagacaaatcgtcaggaatccattatggtgtcattacgtgtgaaggctgcaagggcttt
ttcaggagaagtcagcagagcaatgccacctactcctgtcctcgtcagaagaactgtttg
atcgatcggaccagcagaaaccgctgccagcactgccggctgcagaaatgcctcgccgtg
ggcatgtctcgagacgctgtcaagtttggccggatgtccaagaagcagagagacagctta
tatgctgaggtgcagaagcaccggatgcagcagcagcagcgagaccaccagcagcagcct
ggggaggccgagccgctgacgcccacctacaacatctcagccaatgggctgacggaactg
catgacgacctgagcacctacatggacgggcacacccccgagggcagcaaggccgactcc
gccgtcagcagcttctacctggacatccagccctcccctgaccagtcgggactggacatc
aatgggatcaaacccgaacccatatgtgactacacaccagcatctggcttcttcccctac
tgctcctttaccaacggagagacttctccaactgtatccatggcggaactagaacacctt
gcgcagaacatatccaaatcccacctggaaacctgccagtacttgcgggaagaactgcag
cagataacatggcagaccttcctgcaggaggagatcgagaactatcagaacaagcagaga
gaggtgatgtggcagctgtgtgccatcaagattacagaagctatccagtatgtggtggag
tttgccaaacgcattgacggatttatggagctgtgtcaaaatgatcaaattgtgcttcta
aaagcaggctctctagaggtggtgtttatcaggatgtgtcgtgcctttgactctcagaac
aacaccgtgtactttgatgggaagtatgctggccccgatgtcttcaaatccttaggttgt
gaagacttcattagctttgtgtttgaatttgggaagagtttgtgttctatgcacctgact
gaagatgaaatcgcattattttctgcgttcgtactgatgtcagcagatcgctcgtggctg
caggaaaaggtaaaaatagaaaaactgcaacagaaaattcagctagcccttcaacacgtc
ctacagaagaaccaccgagaagatgggattctaacgaagctaatatgcaaggtgtctacg
ttaagagccttatgtggacgacatacagaaaagctaatggcatttaaagcaatataccca
gacattgtgcgactccattttcctccattatacaaggaattgttcacttcagaatttgag
ccagcgatgcaaatcgatgggtaa
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