Peromyscus maniculatus bairdii (prairie deer mouse): 102918755
Help
Entry
102918755 CDS
T11302
Symbol
Srrm1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102918755 (Srrm1)
03015 mRNA surveillance pathway
102918755 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102918755 (Srrm1)
03041 Spliceosome [BR:
pmav03041
]
102918755 (Srrm1)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102918755 (Srrm1)
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102918755 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102918755
NCBI-ProteinID:
XP_006975729
Ensembl:
ENSPEMG00000006254
UniProt:
A0A6I9LE15
LinkDB
All DBs
Position
2:complement(153919448..153952085)
Genome browser
AA seq
922 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRTKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAVADSVQQR
RQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTP
SPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPQPKRRASPSPPPKRRVSHSPPPK
QRSPPVTKRRSPSLSSKHRKGASPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRG
ASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKK
PPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKAVAVAPAAPAAPAAVSAATTTTSAQEEPAAAPEPRKETESEAEDNLDD
LERHLREKALRSMRKAQVSPQS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaagctcctcaagcagctgaaattcgcagaatgtctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccctggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaacgggaaaaacgctcgagaa
ttcatgggagagctgtggcccctgctgttgagtgcacaagagaacatcgctgggatcccc
tctgctttcctagagttgaagaaggaagaaatcaaacagagacaaatcgaacaagaaaag
ttggcatctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaagag
agcagcagagagaaaagggagcggtctcgcagcccacggagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccggaaaagaaggagaaatct
ccagagctcccggaaccatcagtgagaacaaaagactcttcagtacaggaggccacgtct
acaagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaggaaaagactagaccaagatcgcgatcacgttcc
aaatcacgatctcggacccgttctcgatcaccttctcatactagaccaagacggcgacat
agatcccgatcaaggtcttactctcctagaaggcggccaagcccaagaaggcgaccatct
cctcgaagaagaactccaccaagacggatgccccctccaccaagacacaggaggagtagg
tctccgggccgacgaaggaggcgctcttccgcatcgttgtctggaagtagctcttcgtcc
tcttcatctcgttcccggtcaccaccaaagaagcctcccaagaggacatccagcccccct
cgaaaaactagaaggttatctccttcagcaagtcctcctaggcgaaggcacaggccatca
tctccagcaactccaccacctaaaactcgccattccccaaccccccagcagtcgaaccgt
acaagaaaaagtcgagtttctgtgtctccaggaagaacttcgggtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttcaccagcacccaagccgagaaaagtggagttg
tctgagtctgaagaagacaaaggcagcaagatggctgtagccgattctgtgcagcagagg
cgccagtatagacgacagaaccagcagtcttcatctgactctggctcctcttccacctca
gaagatgagcggcccaagagatcccatgtgaagaatggtgaggtaggccggcgacggaga
cattccccctcccggagtgcctctccctcacctcgaaagcgccagaaagagacttctcct
cggatgcagatggggaagcgatggcaatcgccagtgactaaaagtggtagaaggaggaga
agtccctctccaccaccagccagaaggcgacgatctccttctccagctcctcctccccct
cccccccctcctcctcggcggcgcagatctcccaccccaccaccacgacgaaggactcct
tctcctcccccacgccgccgctcaccttctccaagaagatactctcctcccatccagagg
agatactctccttccccgcctccaaagaggagaaccgcctcacccccaccccagcccaag
cgaagggcatcaccatctccaccaccaaagcgccgggtctcccactctccacctcccaaa
cagagaagccccccagtcaccaagagacgttcgccctccttatcttcaaagcataggaaa
ggggcttccccaggccgctccacccgagaggcccggtcaccacaaccaaacaaacggcat
tcgccctcaccacgtcctcgagctcctcagacctcaagtcctccccctgttcgaagagga
gcatcagcatcaccccaaggaaggcagtccccatctccaagtactaggcccattaggaga
gtctccaggactccggagcctaagaagattaaaaaggctgcctcaccaagccctcagtcc
gtaagaagggtctcctcttcccgatctgtctctggatctcctgagccagcagctaaaaag
cctccagcacctccgtctcctgtccagtctcagtcaccctccacgaactggtcgcccgca
gtaccagtcaaaaaggctaaaagcccaacaccaagcccgtcccctgccaggaattctgat
caagaaggaggtgggaagaagaagaagaagaagaaggacaagaaacacaaaaaggataag
aaacacaagaagcacaaaaaacacaagaaggagaaggctgtggccgtggcccctgcagct
cccgcagcccctgcagccgtttctgctgccaccaccaccacgtcagcacaggaagagcct
gcggcggcacccgagcccaggaaggagactgaaagtgaagctgaggacaaccttgatgac
ctcgaaaggcacctgagggagaaggccctgcggtccatgcggaaggctcaagtgtcccca
cagtcctag
DBGET
integrated database retrieval system
