Peromyscus maniculatus bairdii (prairie deer mouse): 102919369
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Entry
102919369 CDS
T11302
Symbol
Carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102919369 (Carmil1)
Membrane trafficking [BR:
pmav04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
102919369 (Carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Spectrin_5
IL34
Muted
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
102919369
NCBI-ProteinID:
XP_042134212
Ensembl:
ENSPEMG00000013402
LinkDB
All DBs
Position
5:complement(105545132..105838775)
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AA seq
1427 aa
AA seq
DB search
MTDESSDVPQELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARI
PTKLELTFSYLEIHGVICHKPAQMVVETEKCSLSMKMASAEDVSDVLAHIGTCLRRIFPG
LSPLRIMKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNALRGDDLSHMYNF
LAQPNTIVHLDLSNTECSLDMVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPLSFKQFF
SSSLALMQINLSGTKLAPEPLKALLLGLACNHSLKGVSLDLSNCELRSGGAQVLEGCIAE
IHNIVSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEDSPLQSLSLADSKLKAEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRVCVKVQDHLNSLRSCGGDAIQEDLKAA
ERIMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQETLESMAGEVTRVVDEQLKGLLE
NMVDAAENLCPSVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILEALSSSHRKLADHFSRRGKSLPQREALEVELVEEKPVKRATLMVED
LTEVERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIE
DPPFPSVRQEKRSSGFISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAICNISIIPHDGE
QNGLMGRVDEGVDEFFTKKVTKMDSKRSSTRCSDAHELAEGDEKKKRDSRRSGFLNLIKS
RSRSERPPTVLMPEELSSPKGAIRSPPVDTARKDIKAAEHNGAAERTEEAKTPEPLEEGP
AEESGRVERSDSRGSPQGGRRYVQVMGSGLLAEMKAKQERRAACAQKKLVNDITSQDSSS
PVLSSTERTDGGGTVPKLHPGLPEARFGLGTPEKNAKAEPRVDGGCRSRSSSSVPTSPKP
LLQTPKPSPGTRPSIPQKPRTASRPEDTPDSPSGPSSPKVALLPPTLKKAPSDKERDGQN
SPQASPRTLPQEVLQRGDYFKRHSDHDRGKPSGRGKRSSKLYSTIAEEEVNAPGYRKSQP
TNVSRRSWGPQAQECQEQKLRSSGKDGHQGSKSSDSGEETEKEFIFV
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagagctccgatgtgccccaggagttgatggaaagcataaaggatgttatt
ggcagaaagatcaaaatctcagtgaagaagaaagtgaagttggaagtgaagggagacagg
gtggaaaacaaagtgctggtgctcacatcatgccgagccttcctcctgtcagcccgcatc
cccaccaagctcgagttaaccttcagctatctggagattcatggagtcatctgccacaag
ccagctcaaatggtcgtagaaactgagaagtgtagcctgtccatgaagatggcatcagct
gaggacgtgagtgacgtgctggctcacataggcacctgcttgcggaggatatttccaggc
ctctccccactgagaatcatgaagaaagtctccatggagccatctgagcgcctggccagt
ctccaggccctgtgggacagccagaccttggctgagccagggccctgtggtgggttttcc
cagatgtatgcctgtgtgtgcgactggctggggttttcctacagggaagaggtgcagtgg
gatgtggatacaatttacctgacacaagacaccagggaattgaacttacaagacttcagt
catcttgagcacagagacctgatccccatcattgcggccctggaatataatcagtggttc
acgaaactgtcctccaaggatcttaagctgtccacggatgtctgtgaacagatcttgagg
gtggtgagtcggtccaaccggctggaagaattggtgttggaaaatgctggactcagaaca
gattttgcacaaaaattggccagtgctctagcacataatcctaactcaggacttcacacg
atcaacctcgccgggaacccgctggaggatcgaggtgtgtcctccttaagcattcaattt
gccaaactcccaaagggattgaagcatttaaacctttctaaaacctcattgtcacctaaa
ggggtgaacagcctttgtcagtctctcagtgccaaccctctgactgcctctaccctcacc
cacctggacctctcagggaatgctctccgtggagatgacctctcgcacatgtacaatttt
ctggcgcagcccaacaccattgttcatctggatttatctaatacagaatgttctctggac
atggtgtgcagtgctcttctccgggggtgccttcagtgtctcgctgtgctcaatctctcc
agatcggtcttctctcacaggaaaggaaaggaagtccccctgtctttcaagcagtttttc
agcagttctctggctttgatgcaaatcaatctttcaggcacgaaactggctcccgagccc
ttgaaggcactgctcttgggcctggcctgcaatcatagcctgaagggggtttctctggac
ctcagcaactgtgagctgaggtcaggcggagctcaagtgctagaaggctgcatcgccgaa
atccacaacatcgtcagcctggatatctccgacaacggcttagaatccgacctgtctacc
ctaatagtgtggctcagtaaaaacagatccatacagcacctggcgttaggcaaaaatttt
aataatatgaaatccaaaaatctgacgcccgtgttggacaacttagtgcagatgatccaa
gatgaagactctcctctgcagtccttgtccctggctgactcaaaactcaaggctgaggtc
accatcatcatcaatgccctgggcagcaacacctccctgaccaaagtggacatcagtgga
aatggcatgggtgatatgggagcgaagatgctcgccaaggctctgcagatcaacaccaag
ctcaggacagtcatctgggacaaaaacaacatcaccgcccaaggctttcaagatatagca
gttgccatggaaaagaactacacactgagattcatgcccattcctatgtatgatgcctcc
caagctcttaaaacaaaccccgagaagacagaagaggccctacagaagatagaaaactat
ctgctccggaatcatgagactagaaaataccttcaggagcaggcctaccgtctccagcag
ggcatcgtcaccagcactacccagcagatgattgaccgggtgtgtgtgaaggttcaggat
cacctcaactccttgcgatcctgtgggggtgacgctattcaggaggatttaaaggcagcg
gagcggatcatgcgtgatgcgaagaactctaaaacgttgttaccgaacttataccatgtg
ggcggtgcttcctgggcaggagccagtggcctgtcatccagtcccattcaggagaccctg
gaatcaatggccggagaagtcacaagagttgtcgatgaacaactgaagggtttgcttgaa
aacatggtggatgcggctgagaacctctgccccagtgtgatgaaaaaagcccacatccga
caggacctgatccatgccagcactgaaaagatttccatcccacgcacctttgttaaaaat
gtcctgttggaacagtccggaatcgacattcttaacaaaattagtgaggtgaagctgaca
gtggcctctttcctgtctgaccgcatcgtggatgagatcctggaggcgctctccagcagc
catcggaagctggcggaccatttcagtaggcgaggcaagagccttccccagcgagaggcc
ctagaggtggagctggtggaggagaagccggtgaaacgtgccacacttatggtggaggat
ctcaccgaggtggagaggctggaagacctagacacctgtatgactctctgctgtacaagt
atgactcccaagtccaagaggaagagcatccatagccgaatgctgcggcctgtctccagg
gcgttcgaaatggagtttgatcttgacaaagccctggaagaggttccgattcacattgaa
gacccgcctttcccatcagtccggcaggagaagcgaagctcagggttcatttctgagctg
ccctcagaggaaggcaggagactggaacacttcaccaagttacggcccaagcggaacaag
aagcagcagcccacacaggcagcgatctgtaacatcagcatcatcccccatgatggagaa
cagaacggcctcatgggcagagtggatgaaggcgtagatgaatttttcaccaagaaagtg
actaaaatggatagcaagaggtcatccacacgctgctctgatgcccacgaactggccgaa
ggagatgagaagaaaaagcgagattctcggagaagtggctttcttaacctaatcaaatcg
cggtcccgatctgagcggccgcccacagtcctgatgccagaagagctctcctcaccaaag
ggggccatccggagtccaccggtggacaccgccaggaaggacataaaggcagctgagcac
aatggtgctgccgaacgcacagaggaggcgaagacaccggaacccctggaggagggtccg
gccgaggaatccggcagggtggagcgcagcgacagcaggggtagcccacagggtggccgg
cgctatgtgcaggtgatgggcagcgggctgctggctgagatgaaggccaagcaggaacgg
agagcagcatgcgcgcagaagaagcttgtcaatgacatcacctcccaggattcctccagc
ccagtcttgagcagcactgagcggacggatggaggtgggacagtgcccaaattgcaccca
ggtcttccagaggcccgctttggtttgggaacaccagaaaagaatgccaaagcagaaccc
agagtggatgggggctgcaggtctcgaagctcctccagcgtgcccaccagcccgaagccc
ctcctgcagacccccaagcccagcccaggaacccggccctccattccccagaagccaaga
actgcctcccgacctgaagacaccccagactctccatctggtccgagttcccctaaagtt
gctcttcttccacccaccctcaaaaaagccccctcggacaaggagcgcgatggccagaac
agcccccaggccagtcccaggaccctcccccaggaagtactgcaaagaggagattatttc
aaaaggcattcagatcatgacagaggcaagccttctggtagagggaagagatcttcaaaa
ctctactccaccattgcggaagaggaagtgaacgcacctgggtacaggaagtcacagcca
acaaatgtctcaaggagaagctggggtccacaggcccaggagtgtcaagaacaaaaactg
cggtcctccggcaaagacggtcaccagggaagcaaatccagtgactctggagaggagaca
gaaaaagagtttatttttgtgtaa
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integrated database retrieval system
