Peromyscus maniculatus bairdii (prairie deer mouse): 102919749
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Entry
102919749 CDS
T11302
Symbol
Spop
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102919749 (Spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102919749 (Spop)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102919749 (Spop)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
102919749
NCBI-ProteinID:
XP_015864388
Ensembl:
ENSPEMG00000012191
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All DBs
Position
8:82295181..82385530
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttccaagtcctccacctccggcagaaatgtcgagtggtcccgtggcagag
agctggtgctatacacagatcaaggtagtgaaattctcctacatgtggaccatcaataac
tttagtttttgccgggaggaaatgggtgaagtcataaaaagttcaactttttcatcagga
gccaatgataaactgaaatggtgtttgcgagtaaacccaaaagggctggatgaagaaagc
aaagattacctgtcactttacctgttattggtcagttgtccaaagagtgaagttcgggca
aagttcaagttctccatcctgaatgccaagggagaagaaaccaaagctatggagagtcag
cgagcttataggttcgtgcaaggcaaagactggggattcaaaaaatttattcgtagagat
tttctcttggatgaggccaatgggcttctccctgatgacaagctcaccctcttctgtgag
gtgagtgtagtacaagattccgtcaatatttctgggcagaataccatgaacatggtaaag
gttcctgagtgccggctggcagatgaattaggagggctgtgggagaattctcgattcaca
gactgctgcctgtgtgtggctggccaagaattccaggctcacaaggccatcttagcagct
cggtctccagttttcagtgccatgtttgaacacgagatggaggagagcaaaaagaatcgg
gttgaaattaatgacgtggaacctgaagtttttaaggaaatgatgtgcttcatttacacg
gggaaggctccgaaccttgacaaaatggctgatgatttgctggcagctgctgacaagtat
gccctggagcgtttgaaggtcatgtgcgaggatgccctctgcagtaacctctccgtggag
aacgctgcagaaattctcatcctggctgacctccacagcgcagatcaactgaaaactcag
gcagtggatttcatcaactatcatgcttcggatgtcttggagacctctgggtggaagtca
atggtggtgtcacatccccacttagtggctgaagcataccgctctctggcttcggcacaa
tgccctttcctggggcccccacgcaaacgcctgaagcagtcctaa
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