Peromyscus maniculatus bairdii (prairie deer mouse): 102919951
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Entry
102919951 CDS
T11302
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102919951 (Exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102919951 (Exosc9)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102919951 (Exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102919951
NCBI-ProteinID:
XP_006991894
Ensembl:
ENSPEMG00000000544
UniProt:
A0A6I9M2Q1
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All DBs
Position
6:complement(2574931..2586373)
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AA seq
438 aa
AA seq
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MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVLRCSKIAGVKVAEITELIQKALENDQKVRKEGGKFGFAESIANQRITAFKMEK
ASVDTSNIEEKAEEIIAEAEPPPEVVSEPVLWTPGTAQIGDGIGNSWGDLEDSEKEEEEE
GGIDESVILDTKMDTGGVPDTGSQGAPIVLLSDSEEEEMIILEPDKNPKKIRAQTTSARE
KAPSKSQGKRRRKKRTAN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacgccgctctccaactgcgagcgccgcttccttctccgggccatcgaggag
aagaagcggctggatgggagacaaacctatgattacaggaacatcaggatctcattcgga
acagattatggatgctgtattgtagaacttgggaaaacaagagttcttgggcaggtttcc
tgtgaacttgtttctccaaaactcaatagggcaacagaaggtattctgttttttaacctt
gaactttctcagatggctgctccagcttttgaacctggcaggcagtcagatctcttggtg
aagctaaatcgactcttggaaaggtgtctaagaaattcaaagtgtatagacactgaatct
ctctgtgttgttgctggtgaaaaggtttggcagatacgtgtagacctccacttattaaat
catgatggaaatattattgatgctgccagcatagctgcaatcgtagccttgtgtcacttc
cgaagacctgatgtctctgtccaaggagaggaagtaacgctgtatacccccgaagagcgc
gaccccgtgccattgagcatccaccacatgcccatctgcgtcagttttgctttcttccag
caaggaacatatttattggtggaccctaatgagcgagaagaacgagtaatggatggcttg
ctggtgatcgccatgaataagcatcgagaaatttgtactattcagtctagtggtgggata
atgctgctcaaagaccaggttttgagatgcagtaaaatagctggtgtgaaagtagcagaa
attacagagctaatacagaaagctttggaaaatgatcagaaagttaggaaagaaggtgga
aagtttggctttgcagagtcgatagcaaaccagaggatcacagcgtttaaaatggagaag
gcctctgttgatacctccaacatagaggagaaagcagaagaaattattgctgaagccgaa
cctcctccagaagttgtttctgaacctgtgttgtggactcctggaactgcccagattgga
gatggaataggaaactcctggggtgacctagaggattctgagaaggaagaagaggaggaa
gggggcattgatgaatcggtcattcttgatacaaagatggacactggaggagttcctgat
actggaagccaaggtgcccctatagtgctgctgtcagatagtgaagaagaggaaatgatc
attctggagccagacaagaatccaaagaaaatcagagctcagaccaccagtgcaagagaa
aaggcaccaagtaaaagtcaagggaaaaggaggaggaagaagagaactgctaattaa
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