Peromyscus maniculatus bairdii (prairie deer mouse): 102919977
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Entry
102919977 CDS
T11302
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04517
IgSF CAM signaling
pmav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102919977 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102919977 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102919977 (Sptbn4)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102919977 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
102919977 (Sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
PH_11
FlgK_D1
DUF7971
Motif
Other DBs
NCBI-GeneID:
102919977
NCBI-ProteinID:
XP_006995891
Ensembl:
ENSPEMG00000018612
UniProt:
A0A6I9MIK9
LinkDB
All DBs
Position
1:complement(35089126..35180810)
Genome browser
AA seq
2563 aa
AA seq
DB search
MAQVQGEVDNMEGPPASNNNNNPAARWESPDRGWDREPPAAANTTPASLFECSRIKALAD
EREAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRI
HSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNR
ETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNA
NYNLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRI
GKVLDQVLEVDKIIERYEELAAELLAWIQRTVGLISNQKFANSLSGVQQQLQAFTAYCTL
EKPVKFQEKGNLEVLLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGDLEKAEHEREAAL
RAELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEAD
IAAYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLAL
QKVFQEMVYMVDWMEEMQTQLLSRECGQHLVEADDLLQKHGLLEGDIAAQRERVEALNAA
ALRFSQLQGYQPCDPQVICNRVNHVHGCLAELQDQAARRRAELEASRSLWALLQELEEAE
SWARDKERLLEATSGSGGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRTLLQQALRRG
EELAAAGGSVGPGAEPLHLASLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADL
DGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVSGLRRQLATLGGA
SGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQ
WLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRSCQ
DHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQW
RLSGLEAALQALEPRQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALAGAAQACGE
AVAAAGRLQRFLRDLDTFLDWLVRAQEAAGAVEGPLPRSLEEADTLLARHAALKEEVDQR
EEDYTRIVAASEALLASDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQ
LFLRDLCQALAVLRNQEVALSGAELPCTVESVEEAMKKHRDFLTTMELNQQKMQVAVQAA
ESLLRQGNAYGEQAQEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRDCHELDGWIH
EKMLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVR
KKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDL
ATVNSQLKKLQSMESQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLE
PLQERRRLLLASKELHQVAHDLDDELAWVQERLPLALQTERGNGLQAVQQHIKKNQGLRR
EIQAHGPRLEEVLERAGVLASLRSPEAEAVRRGQEQLQSAWAGLREAAERRQQTLDAAFQ
VEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSR
QCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHW
IAEKEVVAGSPELGQDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAA
ATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTA
PPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQ
GWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMN
YHQGLKTELEARVPELTACQELGRSLLHNKSAMADEIQAQLDKLGTRKEEVSEKWDRHWE
WLQQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEE
RFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEPLAR
RASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEASGRVEPAAPTAAALDTTDTPGTPV
VTEQLRPRPERQESADRAEELPRRRRSERQESTEQPEEAARRRRPERQESADHEAPHSLT
LGRYEQMERRRERRERRLERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGLPAG
VPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSA
PAQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDAK
GPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEA
VASSVAEHAEIARWGQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagttcaaggagaagtggacaacatggagggcccaccagcctccaacaacaac
aacaaccccgcagcccgctgggagagcccggatcggggctgggatcgggagcctccggca
gctgccaacaccaccccggcctcgctctttgagtgctctcggatcaaggccttagcagat
gagcgagaggctgtgcagaagaaaaccttcaccaagtgggtgaattcgcacctcgcccgc
gtgggttgccacatcggggacctctatgcagaccttcgggatggctttgtgctcacccgg
ctcctggaagtgctgtccggggagcagctgccgaggcccactcgcggccgcatgcggatt
cactcgctggagaacgtggacaaggccctgcagttcctgaaagagcagcgtgtgcacctg
gagaacgtggggtcgcatgacatcgtggacgggaaccaccggctgacgctggggctggtc
tggaccatcatcctacgcttccagatccaagtcatcaaaatcgagacagaagacaacaga
gagacccgctcagccaaggacgctctgcttttgtggtgccagatgaagacagctggttac
cctgaggtaaacatccagaatttcaccaccagctggagagatggcctggccttcaatgcc
ctcattcaccgtcacaggcctgatcttgtggacttcagcaaactcaccaagtccaacgcc
aactacaacctgcagagagctttccgcacagccgaacagcacctggggctagcacgtctg
ctggaccccgaagatgtgaacatggaggctccagatgagaagtccatcatcacctatgtg
gtctccttctaccactacttctccaagatgaaggctctggctgtggagggaaagcgcatt
gggaaggtcctggaccaggtgttggaggtggacaagatcatagagcgctacgaggagctg
gcggcggagctgctggcctggattcagcgcaccgtgggcctcatcagcaaccagaagttt
gccaactccctgagtggggtgcagcagcagctgcaggctttcactgcctattgtacgctg
gagaagcccgtcaagtttcaggagaaggggaacctggaggtgctgctcttcagtatccag
agcaaactgcgcgcccacaaccggcgcctcttcgtgcctcgggaaggctgtggcatctgg
gatatcgacaaggcatggggtgacctggagaaggctgagcatgagcgggaggcggccctc
agagccgagctcatccgacaggagaagttggaactcttggctcaaagatttgaccacaag
gtggccatgagggagagctggctgaatgagaaccagcgcctggtctcccaggacaacttc
ggatatgaactgccagcagtggaggcagccatgaagaagcacgaggccatcgaagcagat
atcgcagcctatgaggagcgggttcagggtgtagcagagctagcccaggcattggcagct
gaaggctactacgatgcccggcgggtagcagcccaacgtgacagtgtccttcgccagtgg
gccctgctgactgggctggtaggtgcccggcggacccggctggaacagaatctggccctg
caaaaggtcttccaggagatggtctacatggtggactggatggaggagatgcagactcag
ctgctgtctcgggaatgtgggcagcatctggtggaggccgacgacctgctacagaagcat
ggattactggagggggacatcgcagcccagagggagcgggtggaggccctcaatgctgcg
gccctgagattctctcagctgcagggctaccagccctgcgatcctcaggtcatttgcaac
cgcgtgaaccacgtgcacggctgtctggcggagctgcaggatcaggcggcacggcgacga
gcagagctggaggcatcgcggagcctgtgggcgctgctccaagagctggaggaggcggag
agctgggcgcgggacaaagagcgcctcctagaggccacgagcggcagtggcggcgcggcg
ggcacggcggggggcgcgcacgacctgtccagcaccgctcgcctgctggctcagcacaag
atcctgcagggcgaactgggcggccggcggacgctgctgcagcaagcgctgcgacgcgga
gaggagctggctgcggcgggtggctccgtgggtccgggcgctgagcccttgcacttggcc
agcctagcggagcgcgcagcgagcgctcggcgtcggtggcagcggctggaagaggcggct
gcacgcagggaacgaaggttgcaggaggcgcgggctctgcatcagttcggcgctgacctg
gacgggctcctggactggcttcgcgacgcgtaccgcctggcagccgccggcgatttcggt
cacgatgaggcgtccagccgtcgcctggcgcgccagcaccgcgctctcactggggaggtg
gaagcgcatcgcggccctgtgagtggccttaggcgccagctggcgacactgggaggagcc
agtggggccgggccgctggtggtggcgctgcaggtgcgcgtggtggaagccgagcagttg
ttcgccgaggtgaccgaggtggccgcgctgcgacgccagtggcttcgggacgcgctcgcc
gtgtaccgcatgttcggcgaggtgcacgcgtgcgagctgtggattggagagaaagagcag
tggctgctggccatgcgtgtacccgattccctcgacgacgttgaggtggtgcagcaccga
tttgaaagtctggaccaggagatgaacagtctgatgggccgagtcctggatgtgaaccac
acggttcaggagttggtggaaggaggtcaccccagctcagatgaggtgcgctcctgtcag
gaccacctcaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaagaagag
atgagcgccgtgctgctggtggagaaccacgtactggaggtggccgaggtgcgcgcccag
gtgcgcgagaagcggcgcgcggtggagagcgcgccccgcgcgggcggagccctgcagtgg
cgtctgagtggcctggaggcggccctgcaggcactagagccgcgacaggcggcgctgctg
gaggaggcggcgctgctggcggagcgcttccccgcccaggcgacgcgcttgcaccagggc
gcagaggagctgggagccgagtggggcgcgctggccggagcggctcaggcttgcggcgag
gcggtggcggcggcaggtcgcctgcagcgtttcctgcgcgatctggatactttcctggac
tggctggtgcgggcgcaggaggcggcgggtgccgtcgaggggcctttgccgcgcagcctg
gaggaagcggacaccctgctggcgcgccacgccgcactcaaggaggaggtggatcaacgg
gaggaggactacacgcgcatcgtggctgccagcgaggcgctgctggcgtccgacggcgcg
gagctgggccccggcctggcgctagacgagtggctgccgcacctcgaggttggctggcac
aaactgctcggcttgtgggaggagcgcagggaggcgctggtccaggcgcacgtctatcag
ctcttcctcagagacctgtgccaggcgctcgcggtgctgcgcaaccaggaggtggcgctg
tctggcgccgagctcccctgcacggtggagtcagtggaagaggcgatgaagaagcaccgg
gattttctcacgacgatggagctgaaccagcaaaagatgcaggtggccgtacaagctgca
gagagcctgctgcggcaaggcaacgcctacggcgagcaggcgcaggaggcggtggcccgg
ctgctggagaagagccaagagaaccagctgagggctcagcagtggatgcaaaagctcctg
gatcagcttgtgctgcagcacttcctgagagactgtcatgagctggatggctggatccac
gagaaaatgctgatggcccgcgatggcacccgggaggacagccacaagctgcacaagaga
tggctccggcaccaggcgttcatggctgagctggctcagaataaggagtggctggagaag
atcgagagggagggccagcaactgatgcaggagaaacccgagctggcagcctctgtgcgc
aagaagttgggcgagatccggcagtgctgggcggagctggagagtaccacgcaggccaag
gcgcgccagctcttcgaggccagcaaggcggaccagttagtgcagagctttgcagagctg
gacaagaggttgcttcacatggaaagccagctacaagatgtggaccctggtggggacctg
gccaccgtcaacagccagctcaagaagttacagtccatggagtctcaggtggaggagtgg
tgccgtgaggtgggcgagctgcaggcgcagacagcggcgctgccgctggaacaggcgagc
aaggagctggtgggcgagcggcagagcgcggtgggcgagcgcttggtgcgcctgctggag
ccattgcaggagcgccgccgcttgctgctggcctccaaggagctgcatcaggtggcgcat
gacctggacgacgaactggcatgggttcaagagcggctaccgctggccctgcagacagag
cgaggcaacggcttgcaggctgtccagcagcacatcaaaaagaaccagggcctgcggcgg
gagatccaggctcacgggccgcgcttggaagaggtgctggagcgcgcaggcgtgctggcc
tcgctgcgcagccccgaggccgaggctgtgcgccgaggccaggagcagttgcagagtgct
tgggcgggactgcgggaggccgcagaacgacggcagcagacgctggacgccgccttccag
gtggaacagtactactttgatgtggcggaggtggaggcgtggctgggcgagcaggagctg
ctcatgatgagtgaggacaagggcaaggatgaacagagcaccctgcagctgctcaagaag
cacttgcaactggagcagggcgtggagaactacgaggaaagcattgcacagctgtcgcgc
cagtgccgggcgctcctggagatgggacacccagacagtgagcagatcagccggcgacag
tcgcaggtggatcgcctgtatgtggcgctcaaggagctgggggaagaacgcagggtgagc
ctggaacaacagtactggctgtaccagctcagccgccaggtggacgagctggaacactgg
atcgctgagaaggaggtggtggccggctcaccagagctgggccaggacttcgagcatgtg
tcggtgctacaggagaaattctcagagttcgccagtgagaccggaactgcagggcgggag
cggctggcggcggtcaaccagatggtggacgagctgattgagtgcggccacacagcggcg
gccaccatggctgaatggaaggacgggctgaacgaggcctgggccgaactgctggagctc
atgggcactcgggcccagctgctcgctgcctctcgggagctccataagttcttcagcgat
gcccgagagctccaagggcagatcgaggagaagcggaggcggctgccccgcttgacggca
ccacctgagcccagacccagtgccagctccatgcagcggaccctgcgagcctttgagcat
gacctgcagctcctcgtgtcccaggtacggcagctgcaggagggggctgcccagctgcgg
acggtgtatgcgggcgagcacgccgaggccatcgccagccgcgagcaggaggtgttgcag
ggctggaaggagctgctggcagcctgtgaggatgctcgtctgcacgtcagctccacggcc
gacgccctgcgcttccacagccaggcccgtgacctgctttcctggatggacggcatcgcg
ggccagatcggggcagctgacaaacccagggatgtgtcatcggtggaggtgcttatgaac
taccaccagggcctgaagaccgagctggaggctcgcgtgcctgagctgacggcctgccag
gagttggggcgctccctactacacaacaagagtgccatggctgatgagatccaggcacag
ctggacaagctgggaacccggaaggaggaggtgtctgagaagtgggaccgccactgggag
tggctgcagcagatgctggaggtacaccagtttgctcaggaggccgtggtggctgatgcc
tggctgacagcccaggagccactcctgcagagccgggagctgggcagcagtgtggacgag
gtggagcagcttatccggcgacacgaggccttccgaaaagcagcggcagcctgggaggag
aggttcagctctctacggcgcttgaccacgatcgagaaactcaaggcagaacagagcaag
cagccacccacccccttgctggggcgcaagttctttggggaccccaccgagctggcagcc
aaggcggcgcccttgctgcgtccagggggctatgagaggggcctggagcccttggctcgc
cgggcctcggacacgctgtcagcggaggtgcggacccgggttgggtatgtgcgccaggag
ctcaagcccgagcgtctccagccgcgcattgaccggctacccgaggcctcggggagggta
gaacccgcggccccaacagccgcagcgttggacacgacggacacccctgggaccccggtg
gtgacagagcagctccggccccggccggagcgccaggagtcagcggatcgtgcggaggag
ctgccccggagacgacggtcagaacgccaggagtccaccgaacaaccagaggaggctgcg
cggaggcggcggcccgagcgccaggagtccgcggaccacgaggcaccacacagccttact
ctgggtcgctatgagcagatggagaggcggcgggagcggcgggagcggaggttggagcga
caggagtccagcgaacaggagactccaaccaggggagagctggtcaaagggaaggccacc
ctagctgacattgtggagcagctgcaagagaaagaggccggccctgggctccctgctggg
gtgccgtcgctgcctcagcctcgtgaacttccccccggtcgcctgcccaacgggcttgag
ccgcccgagcggacacctcggcccgatcggccgcgggcacgggaccggcccaagccgcgc
cggcggccaaggccacgagagggtggtgagggcgggggaagccggcgctcgcgctccgcc
cctgcccagggaggctccgcccccgctcctccgcctccgcccactcacacagtgcagcac
gagggcttccttctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcg
tgggtgagcctgtactgtgtgctcagcaagggagagctaggcttctacaaggacgccaag
gggccagcttcggggggcacacatggtggggagccgctgctcagcctgcacaaggccacc
agcgaggtggctagtgactacaagaaaaagaagcatgtcttcaagctccagacccaggat
ggcagtgagttcttgctccaggctaaagatgaggaggagatgaatggctggctggaggct
gtggctagctcagtggcagaacacgccgagatcgcccgctggggccagacactacctacc
acatcatccacagatgagggcaaccccaagcgtgagggcggggagcgtagggccagcggg
cgccggaagtga
DBGET
integrated database retrieval system
