Peromyscus maniculatus bairdii (prairie deer mouse): 102920154
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Entry
102920154 CDS
T11302
Symbol
Sdc4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04512
ECM-receptor interaction
pmav04514
Cell adhesion molecules
pmav04820
Cytoskeleton in muscle cells
pmav05205
Proteoglycans in cancer
pmav05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102920154 (Sdc4)
04514 Cell adhesion molecules
102920154 (Sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102920154 (Sdc4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102920154 (Sdc4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
102920154 (Sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmav00535
]
102920154 (Sdc4)
Proteoglycans [BR:
pmav00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102920154 (Sdc4)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102920154
NCBI-ProteinID:
XP_042132717
UniProt:
A0A8C8TKB7
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Position
4:143034020..143053338
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AA seq
196 aa
AA seq
DB search
MASACLLALLLLLLGGFPAVPAESIRETEVRAPQDLMESRYFSGALPDDEDAGGLEFESG
SGELDGSEETRTFPEVIQPLVPINNHIPERAQPGVRVPSEPKELEENEVIPKRVSPSEVD
SDISNKVSMSSTAQDGNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKDEGSYDL
GKKPIYKKAPTNEFYA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcttgcctgctcgccctgctgctgctgctcctgggaggcttccccgccgtc
cccgccgagtcgattcgagagactgaggtcagagcgccccaggacctcatggaaagcaga
tacttctctggagccctccctgatgacgaagatgctgggggcctggagtttgagtccggc
tctggagaactggatggctcggaggagaccaggaccttccctgaagtgattcagcccttg
gtgcctataaataaccacattcctgagagggcacagcctggggttcgtgtcccctcagaa
cccaaggaactggaggagaatgaagtcattcccaaaagggtctcaccctccgaagtggac
agtgatatatccaacaaagtgtccatgtccagcactgctcaggacggcaacatttttgag
agaaccgaggtcctggcagctctgattgtgggcggcgtggtgggcatcctcttcgccgtt
ttcctgatcctgctgctggtgtaccgcatgaagaagaaggatgaaggcagttatgacttg
ggcaagaaacccatctacaaaaaagcccccaccaacgagttctacgcatga
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