Peromyscus maniculatus bairdii (prairie deer mouse): 102920162
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Entry
102920162 CDS
T11302
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102920162 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmav01007
]
102920162 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmav03016
]
102920162 (Farsb)
Enzymes [BR:
pmav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
102920162 (Farsb)
Amino acid related enzymes [BR:
pmav01007
]
Aminoacyl-tRNA synthetase
Class II (U)
102920162 (Farsb)
Transfer RNA biogenesis [BR:
pmav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102920162 (Farsb)
Prokaryotic type
102920162 (Farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
102920162
NCBI-ProteinID:
XP_006972187
Ensembl:
ENSPEMG00000003131
UniProt:
A0A6I9L664
LinkDB
All DBs
Position
13:36333380..36396532
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRSYTDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAQGASDV
VLYKVDVPANRYDLLCLEGLARGLQVFKERIKAPVYKRVIPQGEIQKLIITEETAKVRPF
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTFTAKRPSD
IKFKPLSKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGN
HSKITVNTKNIFIECTGTDLTKAKIVLDVIVTMFSEYCENQFTVEAVEVVSPNGKSSTFP
ELAYRKEMVRADFINKKVGIRESPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIH
ACDIVEDAAIAYGYNNIQMTLPKAYTIANQVPINKLTELLRLDMAAAGFTEALTFALCSQ
EDIADKLGLDISETKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSSKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPSEEKGGYVIKASTG
SAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgagacctgctcttccaagccctgggccggagctacact
gatgaagaatttgacgaactatgttttgaatttggcctggaacttgatgaaattacctct
gagaagcaaatcataagtaaggagcaaggtaatgtaaaggcacagggggcctcagatgtt
gtactttacaaggttgacgtccctgccaacagatacgatctcctgtgtctggaaggactg
gctcggggactccaagtcttcaaagaaaggataaaagctccagtatataaacgagtaatt
cctcagggagaaatccagaaattgattatcacagaagagacagctaaagtacgccctttt
gcggtagctgcagttctccggaatatcaagttcactaaagatcgatatgacagcttcatt
gaacttcaagagaagctacaccagaacatttgcagaaaaagagccttggtcgctattggc
actcatgacttggacactttatcaggcccatttaccttcactgcgaaacgtccttcagat
atcaaattcaagcctcttagtaagaccaaggagtatacagcttgtgaactaatgaatata
tacaagactgacaaccaccttaagcattatttacatatcattgaaaataagcccctgtac
ccagttatctatgacagcaatggtgtggtcctctcgatgcctccaattataaatgggaat
cattcaaaaataacagtaaatactaagaatatatttattgaatgcacaggaactgacctc
actaaggcaaaaatcgtgcttgacgttattgtcaccatgttcagtgaatactgtgaaaat
cagtttacagttgaagcagttgaagtagtttctcctaatggaaaatcaagtacctttcca
gagctggcttacagaaaggagatggtgagagctgatttcattaataagaaagttggaatc
agggaatctcctgcaaaccttgccaagctcctgaccaggatgtgtctgaagtcagaagtc
ataggtgatggcaatcagattgaggttgaaattcctcccaccagagcggacgttatccat
gcatgtgatattgtggaggacgcagctattgcttatggatataacaacattcagatgact
ctgccgaaagcatacaccatagctaatcaagttcctatcaacaagctcacagaactcctc
agactcgatatggcggctgccggcttcactgaggcacttacctttgctctgtgctcccaa
gaagatattgctgataaactcggcttggatatctctgaaacaaaggcagttcacataagc
aatcccaaaactgctgagttccaggtggcgcgtactacccttcttcctggccttctaaag
accattgcagcaaaccggaagatgccacttcctctcaaactgtttgaaatctctgacatt
gtagtaaaagattctagcaaagatgtaggtgcgaaaaactacaggcatctctgtgctgtt
tattacaacaagaaccctgggtttgagatcatccacgggctgctggacagaattatgcag
ctgctcgatgtgcctcccagtgaggagaaggggggctatgtgatcaaagcatccacaggt
tctgcattcttccctgggcggtgtgctgaaatctttgcccggggtcaaagcatcgggaag
cttggcgtccttcatcccgatgttatcaccaaatttgagctgaccatgccctgttcctct
ctagaaatcaatatagagccgtttttgtga
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