Peromyscus maniculatus bairdii (prairie deer mouse): 102920169
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Entry
102920169 CDS
T11302
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102920169 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102920169 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102920169 (Nup107)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102920169 (Nup107)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102920169 (Nup107)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102920169 (Nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
102920169
NCBI-ProteinID:
XP_006973426
Ensembl:
ENSPEMG00000013655
LinkDB
All DBs
Position
18:52704421..52749686
Genome browser
AA seq
925 aa
AA seq
DB search
MDRSSFGEMSSPVIREAEVTRTARKQSAQKRVLIQANQDENFGNTTPRSQIIPRTPSSFR
HPFTPPSRSLLRHPDISCILGTEGRSPRHTQSSGFLGNLSMVTNLDDSTWAAAFSSQRLG
LYTNLEPHNVTEDINLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFELVEEYENI
CASQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMF
AVAAINASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLLSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVSGGTELEPVEGNPYRRIWKISCWRMAEDELF
NKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDEPEELPR
EYMEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRS
NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTSHLPQDL
AVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPSL
DTGTTEEDRIKVDVIDWLVFDPAQRAEAVKQGNAIMRKFLASKKHEAAKEVFVKIPQDSI
AEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLIPQP
TFTEKVAFEHKEKKYEMDYNIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDP
ERAHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEVQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtagctttggggagatgtcatcccctgtgatccgggaggcagaagtgacg
cggaccgcaaggaagcaaagtgctcaaaaacgagttttaattcaggccaaccaagatgaa
aattttggtaatactacaccaagaagccaaattattcctcgaactccaagctcgtttcga
catccttttaccccaccaagccggagcctactcagacacccagatatttcctgcattctt
ggaacagaagggagatctccccggcacacacagtcttctggattcttgggaaatctatcc
atggtaactaatctggacgacagtacctgggcagctgcattctcatcgcagcgtttaggg
ctctacacaaacctggagccccacaatgtgaccgaggacataaacctaagtgctgttatg
ctacgtgaagacgaccctggagaagctgcctccatgagtatgttctctgacttcctgcag
tccttcttgaagcactcttccaccacagtgtttgaacttgtagaagagtacgaaaatatc
tgtgctagtcaggtgaatatactgagtaaaatagtgagcagagcaacccctggactgcag
aagttttcaaagacagccagcatgctctggcttcttcagcaagagatggtcacgtggagg
ctgcttgcatctttgtatagagacagaatacagtcttcattagaagaggaaaatatgttt
gcagttgctgctattaacgccagcgagaagacagttgtggaagcgttgtttcagagggac
tctctggtccgccagagtcagttggtggtagattggctagaaagtattgccaaagatgaa
attggagatttttctgataatattgagttttatgcaaaatcagtatattgggaaaatacc
ctccacaccttaaaacagcggcagctactgtcttatataggaagtgtccggcctctcgtc
actgaactggaccctgatgctcctattagacagaaaatgccgcttgatgatctggataga
gaagatgaagttagattactcaagtaccttttcactctaatccgtgctgggatgacggaa
gaggcgcagaggctttgcaaacgctgtgggcaagcgtggcgagctgcaacactggaaggc
tggaaactctatcacgaccctaacgtcagtggaggaacagagctcgagcctgtggaaggg
aatccatatagacggatttggaagattagctgctggagaatggctgaagatgagcttttt
aataaatacgaaagggcgatctacgctgcactgagtgggaatctgaagcagcttcttcct
gtctgtgacacctgggaagacacagtgtgggcctacttccgggtgatggtggacagcctg
gtagaacaggagattcggacgtcggtaatgacgttggatgaaccggaagagctccctaga
gagtacatggaagcgaattggaccttagaaaaggtttttgaagaacttcaagccactgat
aaaaagagagttctggaagaaaatcaagaacattatcatatagttcagaaattccttatc
ctgggagacatcgatggtttgatggatgaatttagcaaatggctttccaagagcagaagc
aatctacctggacacctcctccgctttatgactcaccttattttgtttttccgaaccctg
ggactacagaccaaagaagaagtttccattgaagttttaaagacatacatacaactttta
ataagtgagaagcacaccaacctcatcgcgttttatacctctcatttgcctcaagacctt
gccgtggcccagtatgcgttgtttctggaaggtgttacagaatttgagcaacggcaccag
tgcctggagctggctaaggaagcagatttggatgttgcaacaataacaaaaactgtagtt
gagaatattcgaaagaaagataatggtgaatttagtcaccatgacctggctccatctcta
gatactggcactactgaggaggaccggataaaggtggatgtgattgactggctggtgttc
gacccggcacagagggcagaggcagtgaagcaaggcaacgccatcatgaggaagttctta
gcatcaaagaaacatgaagctgcaaaagaagtgtttgtgaaaatccctcaggattccatc
gcagaaatctataaccagtgggaggagcaaggcatggagagcccgcttcctgctgaggat
gacaatgccatccgggagcacctgtgcatcagagcctatctggaagcccatgaaacattc
aatgagtggtttaagcacatgaattcggctccacagaaacctacgttgatacctcagcca
acttttacagagaaagtggcttttgaacacaaagaaaaaaaatatgagatggattataat
atctggaaaggacatttagatgccctaactgctgatgtgaaggagaaaatgtacaacgtc
ttgttgtttgtagatggaggatggatggtagatgtcagagaggatgctgaggaggaccct
gagagagcccatcagatggtcctgctaagaaagctctgtctgcccatgctgtgcttcctc
ctccacaccatactgcacagcaccggccagtaccaggagtgcctgcagctggccgacatg
gtgtcctccgagcgccacaaactctacctggtattttctaaggaagaactaaggaaactt
ctgcagaagttaagggaatcctctctgatgcttctagaccaggggcttgacccgctcgga
tatgaagttcagtcataa
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