Peromyscus maniculatus bairdii (prairie deer mouse): 102920242
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Entry
102920242 CDS
T11302
Symbol
Psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03050
Proteasome
pmav05010
Alzheimer disease
pmav05012
Parkinson disease
pmav05014
Amyotrophic lateral sclerosis
pmav05016
Huntington disease
pmav05017
Spinocerebellar ataxia
pmav05020
Prion disease
pmav05022
Pathways of neurodegeneration - multiple diseases
pmav05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102920242 (Psmd1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102920242 (Psmd1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102920242 (Psmd1)
05012 Parkinson disease
102920242 (Psmd1)
05014 Amyotrophic lateral sclerosis
102920242 (Psmd1)
05016 Huntington disease
102920242 (Psmd1)
05017 Spinocerebellar ataxia
102920242 (Psmd1)
05020 Prion disease
102920242 (Psmd1)
05022 Pathways of neurodegeneration - multiple diseases
102920242 (Psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmav03051
]
102920242 (Psmd1)
Proteasome [BR:
pmav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
102920242 (Psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
PA26
Motif
Other DBs
NCBI-GeneID:
102920242
NCBI-ProteinID:
XP_006984259
Ensembl:
ENSPEMG00000001832
UniProt:
A0A6I9LXX1
LinkDB
All DBs
Position
13:3833686..3922556
Genome browser
AA seq
953 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDPMETE
EKTGGVLGGKTPDVSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMTETCRY
QPFKPLSIGGIIILKDTSEDLEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagccgctggaattatttctcttctggatgaagaagagccacagcttaag
gagtttgcactacacaaattgaatgcagttgtcaatgacttctgggcagaaatatctgag
tctgtagacaaaatagaagttttatatgaagatgaaggtttccggagtcggcagtttgca
gccttggtggcatctaaagtattttatcatctgggggcttttgaggagtctctgaattat
gctcttggagcaggcgacctcttcaatgtcaatgataattctgaatatgtggagactatt
atagcaaaatgcattgatcattataccaaacagtgtgtagaaaatgcagatttgcctgaa
ggagaaaaaaagccaattgaccagagattagaaggcattgtgaataaaatgttccagcga
tgtctcgatgatcacaagtataagcaagctattggcattgctctggagaccaggagacta
gatgtctttgagaagactatactggaatctaatgatgttccaggaatgttagcttacagc
ctcaagctctgcatgtctttaatgcagaataagcagtttcggaataaagtattaagagtc
ctggttaaaatctacatgaacttggaaaagcccgatttcatcaatgtttgtcagtgctta
attttcttagatgaccctcaggctgtgagtgatatcttagaaaagctggtgaaggaagac
aacctgctgatggcctatcagatttgttttgatttgtatgaaagtgccagccagcagttt
ttgtcatctgtaatccagaatcttcgaactgttggtacccccattgcttctgtgcctgga
tctactaacacgggtactgtgcccggatcagagaaagacagtgaccctatggaaacggag
gagaagacaggcggtgtactgggagggaagacaccagatgtgagtccagagcccaaggac
cagacactgaaaatgataaaaattttaagtggcgaaatggctattgaattacacttacag
ttcctaatacgaaataataacacagacctcatgattctgaaaaacacaaaggatgcagta
cgaaattctgtatgtcatacagcaactgtaatagcaaactcattcatgcactgtggtact
accagtgaccagtttcttagagacaacttggaatggttggccagagccactaactgggcc
aaatttactgcaactgccagcttgggtgtaatacataagggtcatgagaaggaagcattg
cagttgatggcaacataccttcccaaggatacttctccaggatcggcctatcaggaaggt
ggaggtctctatgcattgggtctcattcatgccaatcatggtggtgacataattgactat
ctccttaatcagctcaagaacgccagcaatgatattgttagacatggaggcagcctgggc
cttggtctggctgcaatgggaactgcacgccaggatgtatatgatttgctgaaaacaaac
ctttatcaggatgatgctgtgacaggggaagcagctggcctggccttaggtttggttatg
ttaggttctaaaaatgcccaggctattgaggatatggttggctatgcccaagaaactcaa
catgagaagattcttcgtggtctagcagttggcattgcattagtgatgtacgggaggatg
gaagaggctgatgctctcattgaatctctctgtcgtgataaggaccccattcttcgaaga
tctggaatgtatactgtggccatggcttattgtggctctggtaacaacaaagctattcga
cgcctgctacatgttgctgtgagtgacgttaatgatgatgtcaggagagcagcagtagag
tcacttggcttcattttattcaggacgcctgaacaatgtccgagtgttgtttctttgttg
tcagagagttacaatcctcatgtgcgctatggagctgccatggctctggggatctgctgt
gctggcacgggaaacaaggaagcaattaatttactagagccaatgacaaatgaccctgtg
aactacgtgaggcaaggggctctgatagcttcagctctcatcatgatccagcagaccgaa
atcacttgtccaaaggttaatcagttccggcagctgtattccaaagtcatcaatgacaag
catgatgatgtcatggccaaatttggcgctattctggcccaaggcatactggatgcaggt
ggtcataatgtcacgatctccttacagtccaggactgggcacactcatatgccttctgtg
gttggcgtccttgtctttacccagttctggttctggtttcccctttcacacttcctgtca
ttggcttatacccctacctgcgtcattggccttaacaaggacttaaagatgccgaaagtt
caatataaatcaaattgtaaaccatccacatttgcatatcctgcccctctggaagtacca
aaagaaaaagaaaaggaaaaggtttccactgctgtgttgtctattactgccaaagctaaa
aaaaaagaaaaggaaaaagaaaaaaaggaggaggagaagatggaagtggatgaagcagag
aagaaggaagagaaagagaagaaaaaggaacctgaaccaaactttcagctgttggataat
ccagcacgagtcatgcctgcccagctaaaggtcttaacgatgacagagacctgcagatac
cagcctttcaaaccactctccattggaggcatcataatcctgaaagacaccagtgaagac
cttgaagaacttgtggaacctgtggcagcacatggccccaaaattgaagaggaggagcaa
gagccagagcccccagagccattcgagtatattgatgattaa
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