Peromyscus maniculatus bairdii (prairie deer mouse): 102920433
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Entry
102920433 CDS
T11302
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102920433 (Sema6c)
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NCBI-GeneID:
102920433
NCBI-ProteinID:
XP_076430653
Ensembl:
ENSPEMG00000024024
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Position
6:75136061..75149396
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AA seq
970 aa
AA seq
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MPPAPHSMPLLLLLLLLSLPHAQAAFPQDPIPLLTSDLQGTSPLSWFRGLEEDAVAAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPDKFLTWRSQDVENCAVRGKQTDE
CYNYIRVLVPWDSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSNVAI
FAEGSLYSATAADFQASDAVVYRSLGQQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDRGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVNLHGRPALFGVFTTQANSIPGSAVCAFYLDDVERGFEGKFKEQRSLDGAWAPV
SEDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGKAGPHRNTTVLFLGSHDGTVLKVLPPGGQSLGPEPIILEEIDAYSPARCG
GKRSARAARRIIGLELDTEGHRLFVAFPGCIVYLPLSRCARHGACRRSCLASQDPYCGWH
RLKGCVTIGGPGGTDMDVTGNQESMEHGDCQDGATGSQSGPGDSAYVLLGPGPSLEIPSS
PSDAHPGPQSSTLGAHTQGVRRDLPPSSASRSIPIPLLLACVAAAFALGASVSGFLVSCA
CRRAHRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAAAPTPQLYTTFLPP
PEGGGPPGPELACLPTPESTPELPVKHLRASGGPWEWNQNGNNASEGPGRPRGCSAAGGP
APRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPPQPPPRQGADALSSAPCPSRRPPAPEP
GAALFADSSPLPRDCAPPPLRLDVPPEGKRAGAGGRPALSAPAPRLGVGRRLPFPTHRAP
PPALLTRVPSAGAARYSGGPGRHLLYLGRPDGYRGRSLKRVDVKAPLSPKPPLAASPPPQ
PAPHGGHFNF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccccctgccccccactccatgcccttgctgctgctgctgctgctgctgtctctgccc
catgcccaggctgcctttccccaggaccccatccctttgttgacctctgacctgcagggt
acttctccattatcctggttccggggcctggaggaggatgctgtggctgccgaacttggg
ctggactttcagcgattcctgaccttgaaccggaccttgcttgtggccgcccgggatcac
gttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccgacaagttt
ctgacatggaggagccaagatgtggagaactgcgctgttcgggggaagcagacggacgaa
tgctacaactacatccgtgttcttgttccctgggactcgcagacgctccttgcctgtgga
acaaactcgttcagccccatgtgccgcagttacgggataacttcgctgcaacaggagggc
gaggagctgagtgggcaagctcgatgcccctttgacgccacccagtcaaatgtggccatc
tttgcagagggcagtttgtactcggccaccgcagccgacttccaggccagtgacgctgtc
gtttacagaagtctcggacagcagcctccactccgttctgccaagtatgactccaagtgg
ttgcgagagccacactttgtctacgctttggagcacggagaccacgtctacttcttcttc
cgagaggtctctgtggaggatgcccggctggggagggtgcagttttcccgggtagcccgg
gtgtgtaaacgtgaccggggtggctcacctcgggccttggatcgccactggacatccttc
cttaagctgaggctcaactgctctgtccctggggactcgaccttctactttgacgtccta
caggccttaactgggcctgtgaacctgcatggccgccccgccctctttggggtcttcaca
actcaagccaatagcattcctgggtctgcagtctgcgccttctacctggatgatgttgag
cgcgggtttgagggcaagttcaaggagcagaggagcctggatggggcctgggctcctgtg
tctgaggacagagtcccctcccccaggccagggtcctgtgcaggtgtgggtggagctgcc
ttgttctcttcctctcaagacctacctgatgatgtcctgctcttcatcaaggcacatcca
ctgctggatcctgctgtgccacctgccacccatcagcccctcctcactctcactagcaga
gccctgctgacccaggtggccgtggatggcaaggccgggccccacagaaacaccacagtc
ctgtttcttggctcccatgatgggacggtgctgaaggtgctacctccagggggacagtct
ctgggacctgagcctatcatactggaagagatcgatgcctacagccctgcccggtgcggt
gggaagcgctcagcccgagctgcacggcggatcatcgggctggagctggacactgagggt
cacaggctctttgtggcctttcctggctgtatcgtctacctcccactcagccgctgtgcc
cggcatggggcatgtcggaggagctgtctggcttctcaggacccatactgtggctggcat
cggttgaaaggctgtgtgactatcgggggacctggtgggactgatatggatgtgactggg
aaccaggaatccatggagcatggtgactgccaagatggagctactgggagccagtccggc
cctggagattctgcttatgtgcttctgggtcctggcccttcccttgagatccccagttcc
cccagtgatgctcacccagggccccagtcttccactcttggagctcacacgcagggcgtg
cgcagggaccttcccccatcttcagcctcccgctccatccccatcccactcctcctggcc
tgcgtggcggccgccttcgccctgggcgcctccgtctccggcttcttggtgtcctgcgct
tgtcgtcgcgcgcaccgccgtcggagcaaggacatcgagaccccggggctgccgcgccct
ctctccctccgcagcctggcccggctgcacggtggcggtcctgagcccccgcctccgccc
aaggatggagatgccgccgccgcgccgacgccacagctctacacgaccttcctgccgccg
cccgagggcgggggacccccgggcccggagctggcctgcctgcccaccccggagtccacg
cccgagctgccggtgaagcacctccgcgcctccgggggtccctgggagtggaaccagaac
gggaacaacgcctcggagggcccgggccgcccacggggctgcagcgcggcgggcgggccc
gcgccgcgcgtgctggtgaggccgcccccgccgggctgccccgggcaggcggtggaggtg
accacgctggaggaactgctgcgctacctgcacggcccgccgcagccgccgccccgccag
ggcgccgacgcgctctcctcggccccgtgcccctcgcggcggccgcccgccccggagccc
ggcgccgccctcttcgcggactccagcccgctaccgcgggactgcgcgccgccgccgctg
aggctcgacgtgccccccgagggcaagcgcgcgggcgcgggcgggcggcccgccctctcg
gccccggccccgcgcctgggcgttggccgccggctgcccttccccacgcaccgcgcgccg
cccccggccctgctgacgcgcgtgccctcggcgggcgcggcccggtactccggcgggccc
gggaggcacctcctctacctgggccggcccgacggctaccgcggccgctccctcaagagg
gtggacgtgaaggccccgctgtcccccaagccgcccctcgccgcctcgccgccgccgcag
cccgcgccgcacggcggccatttcaacttctga
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