Peromyscus maniculatus bairdii (prairie deer mouse): 102920578
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Entry
102920578 CDS
T11302
Symbol
Ddx5
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03040
Spliceosome
pmav05202
Transcriptional misregulation in cancer
pmav05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102920578 (Ddx5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102920578 (Ddx5)
05205 Proteoglycans in cancer
102920578 (Ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102920578 (Ddx5)
03009 Ribosome biogenesis [BR:
pmav03009
]
102920578 (Ddx5)
Enzymes [BR:
pmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102920578 (Ddx5)
Spliceosome [BR:
pmav03041
]
Complex A
U1 snRNP components
U1 related factors
102920578 (Ddx5)
Complex B
102920578 (Ddx5)
Ribosome biogenesis [BR:
pmav03009
]
Eukaryotic type
Pre-60S particles
Helicases
102920578 (Ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
102920578
NCBI-ProteinID:
XP_006970555
Ensembl:
ENSPEMG00000016502
UniProt:
A0A6I9KTJ9
LinkDB
All DBs
Position
8:complement(94009089..94017956)
Genome browser
AA seq
615 aa
AA seq
DB search
MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
AAPMIGYPMPTGYSQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttattccagtgaccgagaccgcggccgggatcgaggatttggtgcaccaaga
ttcggagggagtagaacaggacccctctctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcag
gaacaccctgatttggcaaggcgcaccgcgcaagaggtagatacatacagaagaagcaag
gaaattacagttcggggtcacaactgtccaaaacctgttctgaatttttatgaagcaaac
tttcctgcaaatgtcatggatgtgattgcaagacagaacttcactgaacccactgctatt
caagctcagggctggccagttgctctaagtggattggatatggttggagtagctcagact
ggatctgggaagaccttatcttatttgctgcctgccattgtccacataaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccaactcgagaactggcc
cagcaagtgcagcaagttgctgctgaatactgtagagcttgtcgcttgaagtctacttgc
atctatggtggtgctcccaagggaccacagattcgtgatttggaaagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaacctgaga
agaacaacttaccttgtccttgatgaagctgataggatgcttgatatgggatttgaaccc
caaatacggaaaattgtggatcaaataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcacatc
aacattggtgcactggaactgagtgcaaaccacaacattcttcagattgtggatgtgtgt
catgatgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggcatccacggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacacggaaaagctcctattctgattgctaccgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgggaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgtcgtgacagatactctgcgggc
aaaaggggtggatttaacacctttagagacagggaaaattatgacagaggttactctagt
ctgctgaagagagattttggggctaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttgggagtaattttgtatctgctggtatacagaccagttttcggact
ggtaacccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctaccgcagct
gctgcgcctatgattggctatccaatgccaacagggtattctcaataa
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