Peromyscus maniculatus bairdii (prairie deer mouse): 102920827
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Entry
102920827 CDS
T11302
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav05014
Amyotrophic lateral sclerosis
pmav05200
Pathways in cancer
pmav05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102920827 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102920827 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
102920827 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102920827 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102920827 (Tpr)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102920827 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102920827
NCBI-ProteinID:
XP_006980006
Ensembl:
ENSPEMG00000020078
UniProt:
A0A6I9LJY3
LinkDB
All DBs
Position
11:59350496..59408380
Genome browser
AA seq
2424 aa
AA seq
DB search
MASRGFDGSRRGSLRRAGAREPASEAADGAAQTSGFRASPCSFVSPSAAAAAAAAAAAAT
PADMAAVLQQVLERPELNKLPKSTQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEI
EKRLSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAK
EELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELELKVDELQASDVAVK
YREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNLENKREEVLRLE
EQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSE
AKSNELTRAVDELHKLLKEAGEANKTIQDHLLQAEESKDQMEKEMLEKIGKLEKELENAN
DLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENK
RINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEETDKANK
HSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHL
VSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKISELQHKLENSLTELEQLRESR
QHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTSQTVSTPAPV
PVIESTEAVEAKAALKQLQEIFENYKKEKMDSEKLQNEQLEKLQEQVTDLRSQNTKISTQ
LDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVA
EVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRL
SSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNS
QKETATLKQHLNNMEAQLASQSTQRTGKGQPSDKDDVDDLMSQLRQAEEQVNDLKERLKT
SASNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQE
LQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALTNEQQARRDCQEQAKIAVE
AQNKYERELMLHAADVEALQAAKEQVSKMTSVRQHLEETTQKAESQLLACKASWEERERV
LKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEVVQAPLNTSLSEDGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQDLQDSLNAEREKVQVTAKTMA
QHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEK
SGMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGR
LKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKDLDAKIIDIQEKVKTITQVKKI
GRRYKTQYEELKAQQDKAMETSTQSSGDHQEQHISVQEMQELKDTLNQSETKTKSLEGQV
ETLQKTLSEKETEARTLQEQTAQLQSELTRLRQDLQDRTTQEEQLRQQITEKDEKTRKAI
VAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLEREL
REHQERQLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVST
PSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEH
VPVFGSASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPTNQEMSPNI
VEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAADQVSDDTVEMPLPK
KLKTVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQ
IDLGPLQSDQQTPSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDDDDDDEDDT
GMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGE
GSTSAAESSFSQEAAREQQPTSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQ
RIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVA
GVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVA
APVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNDTAAGDDGDEVFVEAESEGISSEA
GLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGR
QFNRQRGVSHAMGGRGGLNRGNIN
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccggggttttgacgggtcccgccgcgggagtctccggcgggcaggcgcgagg
gagccagcgagcgaggcggcggacggggcggctcagacgtctggcttccgcgcttcgcct
tgctccttcgtttctccttcggcggcggctgctgctgctgccgccgccgccgccgcgacc
ccggccgacatggcggcggtgttgcagcaagtgctggagcgcccggagctgaacaagctc
cctaagtcgacccagaacaaacttgagaagttcctggctgaccagcagtccgagatcgat
ggcctgaaggggcggcacgagaaatttaaggtcgagagcgagcaacagtactttgagata
gagaagaggttatcccagagtcaggagcggcttgtgaatgaaacccgcgagtgtcagaac
ttgcggctggagcttgagaagctaaataaccaagtaaaagtgttaactgagaaaaacaaa
gaactcgaaactgctcaagatcgtaatctaggcattcagagccagtttacaagagcaaag
gaagagttagaagctgaaaaaagagacctaatcagaaccaatgagagattgtctcaggaa
gttgaatatttaacagaggatgttaaacgtctgaatgaaaaacttaaagaaagcaacacg
acgaagggtgaacttgagttaaaggtggatgaacttcaagcttctgatgttgctgtgaag
tatcgagaaaaacgcttagaacaggaaaaggagttgctgcacaaccagaactcatggctc
aacacggagctgaaaaccaaaactgatgagctgttggccctaggaagagaaaaaggaaat
gaaattctggaacttaagtgtaatcttgaaaacaaaagggaagaggttttgagactggaa
gaacagatgaatggcttaaaaacatcaaatgaacatcttcagaaacatgtagaggatttg
ttgacaaaattaaaagaggccaaagaacagcaagccagtatggaagagaaattccacaat
gaattgaatgctcacataaaactctccaatctatacaagagtgctgctgacgactctgag
gccaagagcaatgaactgactcgggcggtggatgaactgcacaaacttctgaaagaggct
ggggaagccaacaaaacaatacaagatcatcttctacaagctgaagaatctaaagatcaa
atggaaaaagaaatgcttgagaaaatagggaaattggaaaaggaattagagaatgcaaat
gacctgctttctgccacaaaacgtaaaggggcgatcttatctgaagaagagcttgcagcc
atgtctcccactgcagcagctgtagctaaaattgtaaagcctggcatgaaattaactgag
ttatataatgcttatgtggaaactcaggatcagttgcttttggagaaactagaaaataaa
agaattaataagtatctggatgagatagtaaaggaagtggaagccaaagcaccgatattg
aaacgccagcgtgaagagtatgagcgtgctcagaaagctgtggcgagtttatctgcaaag
ctggagcaagctatgaaggaaattcagcgactgcaggaggaaactgataaagccaacaaa
cattcgtcagtacttgaaagggacaatcagagaatggaagtgcaaataaaagatctttca
caacagattagagtgctcttgatggagcttgaagaagcccggggtaaccatgtgatccgt
gatgaagaggtcagctctgctgacataagtagctcgtcagaagtgatatcgcagcatcta
gtatcttacaggaatatcgaagagctccagcagcagaaccagcgtctcttatttgctctt
cgagaacttggggaaacccgggaaagagaagaacaagaaacaacatcctctaaaatttct
gagcttcaacacaagcttgagaactctctgactgaactggaacagctccgtgagtcacga
cagcatcaaatgcagcttgttgattccatagttcgtcagcgtgacatgtaccggatttta
ttgtcacagacgacgggaatggccattccattacaagcttcaagtttagatgatatttct
cttgtgtcaactccaaaacgttcaagtacctcacagactgtttctactcctgctccggta
cctgtcattgaatccacagaggctgtagaagccaaggccgccctgaaacagttgcaggaa
atctttgagaactataaaaaagaaaaaatggacagtgaaaaacttcaaaatgagcagtta
gagaaacttcaggagcaagtcacagatctgcgctcacaaaacaccaaaatttcaactcaa
ctagattttgcttctaaacgttatgaaatgctgcaagataatgttgaagggtatcgccga
gaaataacgtctctgcaagagaggaatcagaaactcactgcaacaactcagaagcaggag
cagatcatcaacacaatgacgcaagacttgagaggagccaacgagaagctcgctgttgcc
gaagtaagagcagaaaatttgaagaaggagaaagaaatgcttaaattgtcagaagtccgt
ctttctcagcaaagagagtctttattagcggaacagaggggacagaacttgttgctgact
aatctacagacaatccagggaatactagagcgatcggaaacggaaaccaaacaaaggctg
agtagtcagatagaaaaactggagcacgagatctctcacctgaagaagaagctggagaac
gaggtggaacaaagacatacgcttactcggaatctagatgttcagctgttagatacgaag
agacagctagatacagagataaaccttcatcttaacacaaaagaactgttaaaaaattct
cagaaggaaactgctacactgaaacagcaccttaataatatggaagcccagcttgcttct
cagtctacgcagagaactggtaaaggtcagcctagtgacaaagatgatgttgatgatctt
atgagtcagctacggcaggctgaagagcaggtcaatgacttgaaggagagactcaagaca
agtgctagtaatgtggaacagtatcgggcaatggtgactagtctagaagattccctgaac
aaggagaaacaggtgacagaggaagtgcataagaatattgaagtccgtttaaaagaatca
gcagagtttcagacacagttggagaaaaagttgatggaagttgagaaggagaaacaggaa
cttcaggatgacaagagaaaagccattgagagcatggagcagcagttatctgaattgaag
aagacactttctagtgttcagaatgaagtacaagaagctctgcagagagcaagtacggct
ttaactaatgaacagcaagccaggcgtgactgtcaggaacaagctaaaatagctgtggaa
gctcagaataagtatgagagagaattgatgctgcatgctgctgatgttgaagctctgcaa
gctgccaaggaacaggtttcaaagatgacatcagtccgtcagcatttggaagaaacaact
cagaaagcagagtcacagttgttggcatgtaaagcatcctgggaagaaagagagagggtg
ttgaaggatgaagtttccaagagtgtgtctcgctgtgaagatctagagaaacaaaacaga
ctacttcatgatcagattgaaaaattaagtgacaaggtagttgcctctatgaaggaggtt
gtgcaagcaccattaaatacatctctcagtgaagacggaaaatctcaagaacagatttta
gaaattcttaggtttatacggcgagaaaaagaaattgctgaaacgaggtttgaggtggct
caggttgagagtctgcgatatcgacaaagagttgaacttctagaacgggaattgcaagat
cttcaggatagcctgaatgcagaaagggagaaggttcaggtgactgcaaaaacaatggct
caacatgaagaactgatgaagaaaactgaaaccatgaatgtagtcatggagaccaataag
atgctcagagaagaaaaggaaaggctcgaacagaacctgcagcaaatgcaagcgaaggtg
aggaaactggagttagatattttacctttacaagaagccaatgctgagctaagtgagaaa
agcggtatgctgcaggcagagaagaagctactagaagaagatgtcaagcgttggaaggca
cgcaaccagcatctggtaaatcaacagaaagatccagatacagaagaatatcgaaagctt
ctttctgaaaaggaaattcacactaagagaattcagcagctaaatgaagaagttggaaga
cttaaggctgaaattgcaagatcaaatgcatccttgactaacaaccagaatttaatccag
agtctgaaggaagatttaaacaaagtgcgaactgaaaaggaaaacattcagaaagattta
gatgccaaaataattgatatacaggaaaaagtcaaaacgatcactcaagtcaagaagatc
ggacgcaggtacaagactcagtacgaagagctgaaggcgcagcaggataaggccatggag
acttccactcagtcttctggagaccatcaggagcagcacatctctgtccaggaaatgcag
gagctcaaagataccctcaaccaatctgaaacaaagacaaagtcactggagggtcaagtg
gagacactgcagaagacattatcagaaaaagagacagaagcaagaactctccaggagcag
actgcgcagcttcagtctgaactgacccgccttcgtcaggaccttcaggatagaaccacc
caggaggagcagctccggcagcaaataacggagaaggatgaaaaaacaaggaaggcaatt
gtagccgcaaagtcaaaaattgcacacctggctggtgtaaaagatcaattaactaaagaa
aatgaagagcttaaacaaaggaatggggctttagatcaacagaaagatgaactggatgtc
cggatgactgctcttaagtcccagtatgaaggccggattagtcgcttagagagagagctc
agagagcatcaagagagacaacttgagcagagagatgagcctcaggaacccactaataag
gctccagaacagcagagacagatcacactgaaaaccactccagcttccggggaaagagga
attgccagcacatcagacccaccgacagccaatatcaagccaactcctgttgtttctact
ccaagtaaagtgacagcagcagccatggctgggaataagtcaacgcccagggcaagtatc
cgcccaatggttacacctgcaactgtcacaaacccaaccactaccccaacggcaactgtc
atgcccaccacccaggtggagtcccaggaagctatgcagtccgaagggccagtggaacac
gttccagtgtttggaagtgcgagtggatctgttcgttctactagtcctaatgttcagccc
tccatttctcagcccatcctaactgtacagcagcaaacacaggctacagcttttgtgcaa
cccactcaacagagtcaccctcagattgaacccacgaatcaagagatgtccccaaacata
gttgaggtggtacagagttcaccagttgagcggccatctacttccacagcagtatttggc
actgtttcagcgacccccagctcctccttgccaaagcgcacccgggaggaggaggaggac
agcaccatggaagcagcggaccaggtctccgatgacacggtggagatgcctctcccgaag
aagctgaagacagtcacccccgtggggaccgaggaagaagttatggcagaagaaagtact
gatggagaggtggaaactcaagtttataatcaggattctcaagattccattggagaggga
gtcacccagggagattatacacctatggaagacagtgaagaaacttcacagtctctacaa
atcgatcttggaccccttcagtcagatcagcaaactccttcttctcaggatggtcaaggc
aaaggagatgatgtaattgtaattgacagtgacgatgaagatgatgatgaagaaaatgat
ggagaacatgaagattatgaagaagatgaagatgatgatgacgatgatgaagacgacacg
gggatgggagatgagggtgaagatagtaatgaaggcactggtagtgcagatggtaatgat
ggatatgaagctgatgatgctgagggtggtgatgggactgatccaggtacggaaacggaa
gaaagtatgggcggagctgaaagtaaccagagagctgctgattcccaaaacagtggtgag
gggagtacaagtgcagcagagtcgtctttctctcaggaggctgctcgagaacagcagccc
acatcagcatcggagagacagacccctcgagcaccccagtcaccaaggcgcccaccacat
cctcttcccccacgcctgaccattcacgctccacctcaggagttgggaccaccagttcag
agaattcagatgacccggaggcagtctgtagggcgtggacttcagttgactccaggaata
ggtggtatgcaacaacacttttttgatgatgaagacaggacagttccgagtaccccaact
cttgtggtgccacatcgcactgatgggtttgctgaagctattcattccccacaggttgct
ggtgttcctagattccggtttgggccacctgaagatatgccacagacaagttccagccac
tctgatcttggccaacttgcttctcaaggaggtttgggaatgtatgaaacacccctcttc
ctggctcatgaggaagagtctggtggccgcagtgttcccactacacctctccaagtagca
gctccagtgactgtgtttactgagagtaccacctctgatgcttcagaacatgcctctcag
tctgttccgatggtgacaacgtccacaggcactttatccacgacaaacgacacagcagca
ggtgacgatggagacgaagtgtttgtggaggcagagtctgaaggtattagttcagaggca
ggcctagagattgacagccagcaggaagaggaacctgtgcaagcatctgatgaatctgat
ctcccctcgaccagccaggaccctccttccagctcttctgtggatactagcagtagtcag
ccaaagcctttcagacgagtaagacttcagacaacattgagacaaggcgtccgtggtcgt
cagtttaacagacagagaggtgtaagccatgcaatgggaggaagaggaggactgaataga
ggaaatattaattaa
DBGET
integrated database retrieval system
