Peromyscus maniculatus bairdii (prairie deer mouse): 102920906
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Entry
102920906 CDS
T11302
Symbol
Nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102920906 (Nfx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102920906 (Nfx1)
04121 Ubiquitin system [BR:
pmav04121
]
102920906 (Nfx1)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102920906 (Nfx1)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102920906 (Nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
102920906
NCBI-ProteinID:
XP_006975399
Ensembl:
ENSPEMG00000007625
UniProt:
A0A6I9L9N9
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All DBs
Position
2:65950709..66028335
Genome browser
AA seq
1114 aa
AA seq
DB search
MAEAPPVSGTFKFNTDAAEFIPQERKNSGLNCGPQRRLDSNRIGRRNYSSSPPCHLPRQV
PYDDISAVHQHSYASGSKPKSHQAFFQVSNKSLKNHGLQNQPWQKLRNEKHQSRVKRAQG
LTDQTSDASSLESVARSESGTDPREHSPSESETDVVIADPRGAKPKKAAQLTYNYGRGPK
AKGKLKCEWGNRVSPKSEDETSRPVGVSHADFSDAPCRKAVVEGCVSRRNEQRRYPQKRP
PWEVEGARPRPGRNPPKQESQRHINSGPKNNMPPIPKDNLRERLTKSGCDTGNLAVVNKS
SRRAGQEKNAARRQDPQVLSPFPRGKQNHMLKNVETHTGSLIEQLTTEKYECMVCCELVQ
VTAPVWSCQSCFHVFHLNCIKKWARSPASHADGQSGWRCPACQNVSAHVPNTYTCFCGKV
KNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFTTKTCECGRTRHTV
RCGQAVSVHCSNACENILNCGQHHCAELCHGGQCQPCRIILNQVCYCGSTSRDVLCGTDV
GKSDGFGDFSCLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRCCPCGQTPLSQLLD
LGSNGRKTCMDPVPSCGKVCGKPLSCGSSDFIHTCEKLCHEGDCGPCSRTSVISCRCSFR
TKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRC
EEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARIHECDHPVYHSC
HSEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCGAMLPCGMHKCQRLCHKGEC
LVDEACKQPCTTPRADCGHPCMAPCHPSLPCPVTACKAKVELQCECGRRKEMVICSEASG
TYQRIAAISMASKITDMQLGDSVEISKFITKKEVQQARLQCDEECSALERRRRLAEAFDI
SDDSDPFNVRSSASKFSDSLKDDARKDLKFVSDIEKEMETLVEAVNKGKSLKKSHCFPPM
NRDHRRIIHDLAQVYGLESMSYDSEPKRNVVVTAVRGKSICPPTSLTSVLERETQTRPPP
PIPHHRHQTDKIPGSSNLQKIAKEPVIDYFDVQD
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcctccggtctcaggcacttttaaattcaatacagatgctgctgagttc
attcctcaggagagaaaaaattctggtctaaattgtgggccccaaagaagattggactct
aacaggatcggcagaagaaattatagttcctcacctccctgtcaccttcctaggcaggtc
ccttatgatgacatctctgctgttcatcagcacagctacgcctctggaagcaaaccgaag
agtcaccaggcttttttccaggtgtctaataagtccctcaagaaccatggccttcagaat
cagccatggcagaaactgaggaatgaaaagcaccaaagcagagtcaagagagcacaaggg
ctcactgaccagacgtcagatgcatctagtttagaaagcgtggccaggtcagagagtgga
acagaccccagggagcacagcccttctgagagcgagacagacgtggttattgcagatccc
aggggcgcaaagcccaagaaggcagcccagcttacgtacaactatggcagaggaccaaag
gccaaagggaaactcaaatgtgagtggggaaacagagtgagccccaagtctgaggatgaa
actagcagacctgtgggcgtttcccacgctgacttctcagatgcgccctgtaggaaagct
gtagtggagggatgtgtgtcaagacggaatgagcagagaagatacccacagaaaaggcct
ccctgggaagtggagggcgcccgaccacgaccaggcaggaacccacccaaacaggagagt
cagcgacatataaattcagggcccaaaaacaacatgccccccattccaaaggacaatctc
agagaaagactgacgaagtcaggctgtgacactgggaatctggcagttgtcaacaagtcc
tccagaagggctggccaagagaagaatgctgcgcggagacaggacccccaagtgctctct
cccttccccagaggcaaacagaaccatatgctgaagaatgtggaaacacacacaggttcc
ctcattgagcagctaactacagaaaagtacgagtgtatggtgtgctgcgagctggttcag
gtcaccgccccagtgtggagctgccagagctgtttccacgtcttccatctgaactgcatc
aagaagtgggcccgctccccagcgtctcatgcagatggccagagtggttggaggtgccct
gcttgtcagaatgtttctgcacatgttcctaatacctatacttgtttctgtggcaaagta
aagaatcctgaatggagcagaaatgaaattccacatagttgtggtgaggtttgtaggaag
aaacagcctggccaggactgtccacattcctgtaaccttctctgccatcctggaccctgc
ccaccctgccctgcttttacgactaaaacatgtgaatgtggacggaccaggcatacagtt
cgctgtggtcaggctgtctcggttcactgttctaatgcctgtgagaatattttgaactgt
ggtcagcaccactgtgctgagctatgccatgggggtcaatgccagccttgccggatcata
ttaaaccaggtgtgctactgtggcagcacctcccgagatgtgttatgtggaacagatgtg
gggaaatcggatggattcggggacttcagctgtttaaagatatgtggcaaggacttgaaa
tgtgggagccatacctgttctcaagtgtgccacccgcagccctgccagccttgcccacgg
ctcccccatttggtgcggtgttgcccttgtggccaaacacctctcagccagttgctggat
cttggaagtaatggtcggaaaacatgcatggatcctgttccttcatgtggaaaagtgtgt
ggcaaacccttgtcctgtggttcctcagatttcatccatacctgtgaaaagctctgccat
gaaggagactgtggaccatgctctcgcacatcagttatttcctgcagatgctctttcaga
acaaaggagcttccatgtaccagtcttaagagtgaagatgctacatttatgtgtgacaag
cggtgtaacaagaaacgattgtgcggacggcataaatgtaacgagatatgctgtgtggac
aaggagcacaagtgtcctttgatttgtgggaggaaactccgttgtggccttcatcggtgt
gaagagccttgtcaccgagggaactgtcagacctgctggcaagccagttttgatgaatta
acctgccactgtggcgcctctgtgatctacccaccagttccctgtgggactaggcctcct
gagtgtacccaaacctgtgccagaatccatgaatgtgaccatccagtgtatcattcttgt
catagtgaggagaaatgtcccccttgtacgttcctgactcagaagtggtgcatgggcaag
catgagttacgaagcaacatcccctgtcacctggttgatatctcttgcggattaccctgc
ggtgccatgctaccctgtgggatgcacaaatgtcaaagactctgtcacaaaggagaatgt
cttgtggatgaggcctgcaagcagccctgtaccacacccagagctgactgtggtcaccca
tgtatggcaccctgccaccccagtttaccctgccctgtgacagcttgtaaagccaaggta
gagttacagtgtgaatgtgggagaagaaaagaaatggtgatctgctctgaagcgtccggc
acctaccaaagaatagctgctatttctatggcctctaaaataacggacatgcagcttgga
gattcagtggagatcagcaagttcattaccaagaaggaagtccaacaagccaggttgcag
tgtgatgaggagtgttctgccttggagaggagaaggaggttggcagaggcatttgacatc
agtgatgattctgatcctttcaatgtacgttcttcagcatcaaaattcagtgacagtctg
aaagatgatgccaggaaagacctaaagtttgtcagtgacattgagaaggaaatggaaacg
cttgtggaggccgtgaataagggaaagagtcttaagaaaagccactgcttcccccccatg
aacagagaccaccgccgcatcatccatgacctggcccaagtctacggcctggagagcatg
agctatgacagtgaaccaaagcgcaacgtcgtggtcactgctgtcagggggaaatccatt
tgtcctcccacctcgctgaccagcgtgcttgaaagggaaacgcagacgcggcctccacca
ccgattcctcatcaccgacaccagacagacaagattcctgggagcagtaatttacagaag
atagctaaggagccagtgattgactactttgatgtccaggactga
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