Peromyscus maniculatus bairdii (prairie deer mouse): 102920932
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Entry
102920932 CDS
T11302
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102920932 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102920932 (Usp39)
Spliceosome [BR:
pmav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102920932 (Usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102920932
NCBI-ProteinID:
XP_042129392
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Position
3:complement(94330495..94360315)
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AA seq
564 aa
AA seq
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MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREREPEAASSRSSPVRVKREAEPTARE
IPAPAPPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDETNQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggtctaagcggcagtctcatggttccacccgcgggaagcgcgagtccgag
tcgcggggtagctcgggccgcatcaagaaggagcgagaccgcgagcgggagcccgaggcg
gcgagctctcggagcagcccggtccgcgtgaagcgtgaagccgagccgactgcgcgagaa
atcccggcgcccgcgcccccggccgtgagggtgaagcgggaacgcgaggccgacgaggac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattctgaggaccggagg
agtcgtcactgcccgtatctggataccattaacaggagtgtactggacttcgactttgag
aaactctgctctatctccctctcgcatatcaacgcctatgcctgtctggtgtgtggcaaa
tactttcaaggccggggattaaagtctcatgcctacatccacagcgtccagttcagccac
catgtcttcctcaacctccacactctcaagttttactgccttcctgacaactatgagatc
atcgattcctcactggaggatatcacgtacgtgctgaagcctactttcacaaagcagcaa
attgcaaacttggacaagcaagccaaattgtcccgggcgtacgatggtaccacttacctg
ccagggatcgtggggctgaacaacatcaaagccaacgactatgcaaatgcagtgctgcag
gctctgtctaatgttcctcctcttcggaactacttcctggaggaagacaattataagaac
atcaagcgccctccaggggatatcatgttcttgttggtccagcgttttggagagctgatg
agaaagctctggaacccccgaaacttcaaggcacatgtttctcctcatgagatgcttcag
gctgttgtcctttgcagcaagaagactttccagatcaccaaacaaggggatggcgttgac
ttcctgtcttggtttctgaatgctctgcactcggctctgggtggcaccaagaagaagaag
aagactattgtgactgatgttttccaggggtcaatgagaatcttcaccaaaaagcttcct
catcctgatctgccagcagaagagaaagagcagctgctccacaatgatgagtaccaggag
acgatggtggagtccacgttcatgtacctgacactggaccttcccacagccccgctgtat
aaggacgagaaggagcagctcatcatcccccaggtgccgctcttcaacatcctggccaag
ttcaacggcatcaccgagaaggagtacaagacttataaggaaaacttcttgaagcgcttc
cagctcaccaagctgcctccatatctaatcttttgcatcaagagatttactaagaacaac
ttcttcgtggagaagaatccgacaattgtcaacttccctatcacaaatgtggatctgaga
gaatacttatctgaagaagtccaggcagtccacaagaacaccacttatgatctcattgcc
aacattgtgcatgatggcaagccctccgagggctcctataggatccacgtgcttcatcat
ggaactggcaagtggtatgaattacaagacctccaggtgactgacatcctgccccagatg
atcaccttgtccgaggcctacattcagatttggaagaggcgggataatgatgaaaccaac
cagcagggggcttga
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integrated database retrieval system
