Peromyscus maniculatus bairdii (prairie deer mouse): 102921003
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Entry
102921003 CDS
T11302
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102921003 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102921003 (Otx1)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
102921003 (Otx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
102921003
NCBI-ProteinID:
XP_006974866
Ensembl:
ENSPEMG00000000389
UniProt:
A0A6J0D6T5
LinkDB
All DBs
Position
10:complement(24119908..24126270)
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AA seq
355 aa
AA seq
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MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKSRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPASVSVPEPLGAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSS
SYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPAAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccgtacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcacccctctgtgggctatcctgccactccgcggaagcaacgccgg
gaacgcaccaccttcacgcgctcacagctggacgtgctggaggcgctcttcgcaaagact
cgctacccagacatcttcatgcgggaggaggtggcgctcaagatcaacctgcccgagtcc
agagtccaggtctggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aacggaacgaaaagccggccggttaagaagaagtcgtccccggtgcgcgagagctcgggc
tcggagagcagcggccagttcacgccgccggccgtgtccagctctgcctcttcgtcgagt
tcggcgtccagtgcctccgccaacccggcggctgctgcggccgcgggcctgggaggaaac
ccggtggcagccgcgtcctctctgagtacgcctaccgcttcgtccatctggagtccggcc
tccatctcgccaggctcggcgccggcatccgtgtccgtgccagagcccctgggcgcgcca
agcaacgcctcgtgtatgcagcgctcggtagccgcaggtgctgccactgcggcggcctcc
taccccatgtcctatggccagggtggaagctacggccagggctaccccgcgccctcctcc
tcttactttggcggggtagactgcagctcctacctagcgcccatgcactcgcatcaccac
ccgcaccagctgagccccatggcaccctcctccatggctggccatcaccaccaccacccg
cacgcacaccacccactgagtcagtcttcaggccaccaccaccaccatcaccaccaccac
caccaccaaggttacggaggctctgggctcgccttcaactctgccgactgcttggattac
aaggagcccgccgctgccgctgcttcctctgcctggaaactcaacttcaactctcccgac
tgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga
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