KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102921293
Entry
102921293         CDS       T11302                                 
Name
(RefSeq) replication factor C subunit 1-like
  KO
K10754  replication factor C subunit 1
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03030  DNA replication
pmav03410  Base excision repair
pmav03420  Nucleotide excision repair
pmav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102921293
   03410 Base excision repair
    102921293
   03420 Nucleotide excision repair
    102921293
   03430 Mismatch repair
    102921293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmav03032]
    102921293
   03400 DNA repair and recombination proteins [BR:pmav03400]
    102921293
DNA replication proteins [BR:pmav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102921293
DNA repair and recombination proteins [BR:pmav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102921293
SSDB
Other DBs
NCBI-GeneID: 102921293
NCBI-ProteinID: XP_076400160
LinkDB
Position
9:110540499..110559734
AA seq 1172 aa
MNKVGTSKLWESHKEECNAFSHSARVEDIRKFFGVISSGKKPVSESVKKNEKVKPSEGTV
KGKKGAKEVKANNSSKEDVSKPKPHKRKRIIYDSDSESEETVQVKNAKKKSEKSEKLPLS
SKPGKISRKDPVTYISETDEDDDFVCKKAASKSKENGVSANSHRGASTAKKNEETTKTKN
KPLSPIKLTPTSVLDYFGTESVQRSGKKMVASRRKESSQNMDDSRLNDEAIAKQLQLDED
AELERQLHEDEEFARTLAMLDEEPKTKKARKDPEEGESFSPVQADISKAENHKSPDKEHF
LNERKPGSPAQPSRGGCSRGSAQPCRSSARQSEACSSPKASSKLALMKAKEERSYKDTEL
TASKRKENAIELKGEKQTPKKTKSSPAKKRVYPEDSEKKRTNYQAYRSYLNREGPKALGS
KEIPKGAENCLEGLTFVITGVLGSIEREEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQ
SKSDKAAALGTKILDEDGLLDLIRTMPGKKSKYEIAAEAEMKKEKSKLERTPKKNDQGKR
KVSPTEKESASKKSKPTPQKDSPAKATKKEANVFRRGLDFTEQAVKETPGPGRARGPAED
RSGDRVESLLWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNWHQSSPEEKKDAKFGKLS
SKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNN
TSIKGFYTSGATPSVSSKHALIMDEVNGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRN
HPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLH
NMSMWCAQSKALTYDQAKADSQRAKKDIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFH
DYSIAPLFVQENYLHVKPVAAGGEMKKHLMLISRAADSICDGDLVDSQIRSKQNWSLLPT
QAIYASVLPGELMRDYMTQFPSFPSWLGKYSSTGKHDRIVQDLALHMSLRTYSSKRTVNM
DYLSHIRDALVRPLASQGVEGVQHVVTLMDTYFLMREDFENIMEVSSWGGQPSPFSRLDP
KVKAAFTRAYNKEVHLTPYSLQVVKTLRLSTGPALDSEYHEELQEEDSQSDEKEQDAIET
DAMIKKKTRSSKPSKPDKDKESKRGKGRSWKK
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgaacaaagtaggaacaagcaaactctgggaaagccacaaggaagaatgcaatgccttc
agccacagcgcacgtgtggaggacattcggaaattctttggggttatatcaagtggaaaa
aagcctgtgagtgagagcgtcaagaagaatgagaaagtaaaaccttcggaggggactgtc
aaagggaagaagggagcaaaggaggtcaaggctaataactccagtaaagaggatgtctcc
aaaccaaagccgcacaagaggaagaggatcatctatgactcagattcagaatcagaggag
acagtgcaggtaaaaaatgctaaaaagaaatcagaaaaatcagaaaaattgccactgtct
tctaaacctggtaaaatttctcggaaggatcctgttacttacatttctgagacagatgaa
gatgatgactttgtgtgtaaaaaggcggcctccaaatccaaagagaatggagtgtctgca
aacagtcaccgtggagcatcaaccgcgaaaaagaatgaagagaccactaagaccaagaat
aaacctttatcaccaataaagcttacaccaacgtcagtgctcgattattttggaaccgaa
agtgtccagagatctggaaagaagatggtggcaagcagaagaaaagagtcttctcaaaac
atggatgactccaggttaaatgatgaggccattgccaagcagttgcagcttgatgaagac
gcggagctggagaggcagttgcatgaagatgaagagtttgctcgaacgttagccatgttg
gatgaagaacccaagaccaaaaaggcccgaaaggaccctgaagagggagaatcattttca
cccgtccaagctgatataagcaaagcagaaaaccataaaagccctgataaagagcacttc
ttaaacgaaaggaagcctggcagtcctgctcagcccagcaggggtgggtgctccagaggg
tctgcccagccctgcagatcgtcagctcgccagagcgaagcctgttcctctcccaaggct
agctccaagctggcacttatgaaagcaaaagaggaaaggtcctacaaagacacagagctg
acggcctcaaaaaggaaagaaaacgccattgaactcaaaggagagaaacaaactcctaag
aaaaccaaaagttctccagctaaaaaaagagtctatccagaagattctgaaaagaaacgc
actaattatcaagcttatcgaagctacttaaatcgagaaggtcccaaagctctgggctcc
aaagaaatacccaagggagctgaaaattgcttggaaggcctgacctttgtgatcacaggc
gtgctggggtccattgaacgcgaagaggccaagtctctaattgaacgttatggagggaag
gtaacaggaaacgtgagcaagaaaaccaactatctcgtcatgggccgggacagcggacag
tccaagagtgacaaggcagccgctctgggaacaaaaatccttgatgaagatggtctgttg
gatctgattcgaactatgccaggcaagaaatccaagtatgaaatagctgctgaagctgag
atgaagaaagaaaagtccaaattggagcggacacccaaaaaaaatgaccagggaaaaaga
aaagttagcccaactgagaaggagtcagcgtctaaaaagagcaaaccgaccccccaaaag
gacagccctgcaaaggccaccaagaaggaagcgaatgtgtttcggaggggcctggacttc
acggagcaggcggtcaaggagacgcctggccccggcagggctcggggtccggccgaggac
cgcagtggggaccgagtggagagcctgctctgggtggataagtacaagcccacctcactc
aagaacatcatcggacagcagggggaccagagctgtgccaacaagctgctgcgctggctc
cggaactggcaccagagttctcccgaagagaagaaggacgcaaaattcggcaaactttcc
agcaaagatgacggctccagtttcaaggcagcactgctctccggcccaccgggcgttggc
aaaaccacaaccgcttcccttgtgtgccaggaattgggctacagttacgtggaactaaat
gcaagtgacactcggagtaagaacagtttgaaagcagttgttgctgaatccttgaacaac
accagcatcaaaggcttttatacaagtggagcaactccttcagtaagctcgaagcatgct
ctcatcatggatgaggtcaacggcatggccggcagtgaggacaggggcggaattcaggaa
ctaataggcctgataaagcatactaaaattcccatcatttgtatgtgcaatgacagaaat
caccccaaaattcgctctttggttcattattgttttgatcttcgtttccaaagacctcgg
gttgaacagattaagagtgcaatgctgtctattgcatttaaagagggtttaaagatccct
cctccagctatgaacgaaataattttgggagcgaatcaagatgtcagacaggttttacat
aatatgagcatgtggtgtgcacagagcaaggcactgacttacgaccaagccaaggctgac
tctcagagggccaagaaggacatcaaactgggtccatttgatgttgcccggaaagtgttt
gcagctggagaggagactgcacacatgtccctgatggacaaatcggatctctttttccat
gactattccatagcccccctctttgtccaggagaactacctccatgtgaagcctgtggct
gcagggggggaaatgaagaagcacctgatgcttataagccgggccgcagacagcatttgt
gacggtgacttagtggacagtcagatccggagtaagcaaaactggagtcttctgcccaca
caggccatttatgccagtgttcttcctggagagttgatgagggactatatgactcagttt
ccctccttcccaagctggctggggaagtactcatccacgggcaaacatgatcggattgtt
caggacctagccttgcacatgagtctcagaacttactccagcaaaaggacagtgaacatg
gattacctgtcacacatcagagatgcccttgtgcgacccttggcctcacaaggggtagaa
ggagttcagcatgttgtcacacttatggacacatactttttgatgagagaagactttgag
aatatcatggaagttagcagctggggtggccagcccagtcccttttccaggctggatccc
aaggtgaaagcagccttcacaagagcttataacaaggaggtccatctgaccccatactca
cttcaggtagtaaagacattgagactcagcacaggcccagcactggattctgaataccat
gaagagttacaagaagaagacagtcagtctgatgagaaagagcaggatgcaatagagacc
gatgccatgatcaagaaaaagacaagatcttcaaagccttcaaaaccagacaaagacaag
gagtccaaaagaggaaaaggaagaagctggaagaaatga

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