Peromyscus maniculatus bairdii (prairie deer mouse): 102921466
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Entry
102921466 CDS
T11302
Symbol
Tia1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pmav
Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102921466 (Tia1)
03041 Spliceosome [BR:
pmav03041
]
102921466 (Tia1)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102921466 (Tia1)
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102921466 (Tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
DUF1866
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
102921466
NCBI-ProteinID:
XP_006984648
Ensembl:
ENSPEMG00000001090
LinkDB
All DBs
Position
3:complement(109414101..109448240)
Genome browser
AA seq
376 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYESNTKQLSYEEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQQNQIGYPPAYGQWG
QWYGNAQQIGQYVPNGWQVPAYGMYGQPWSQQGFNQTQSSAPWMGPNYSVPPPQGQNGSM
LPNQPAGYRVAGYETQ
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatatgttggtaacctttcccgagatgtgacagaa
gctctcatcctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacggcagggaatgacccatactgttttgtggagtttcatgagcatcgtcatgcagct
gcagcactggctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcaatcatttccatgtgtttgttggt
gacctcagtccagaaatcacaactgaagacatcaaagcagcttttgcaccgttcggaaga
atttcagatgctcgcgtggtaaaagacatggctacagggaagtctaagggatacggcttt
gtctcctttttcaacaaatgggatgcagaaaatgccattcagcagatgggtggccagtgg
cttggtggaagacaaatcagaactaactgggcaacccgaaagcctccagctccaaagagt
acatatgagtcaaacaccaagcagctgtcgtacgaggaggttgtcagtcagtccagcccc
agcaactgcactgtgtactgcggaggggtgacgtcgggactgacagaacaactaatgcgt
cagactttttctccatttggacaaataatggaaattcgagtcttcccagataaaggatat
tcatttgttcggttcaattcccatgaaagtgcagcacatgcgattgtttctgttaatggt
accaccattgaagggcatgtggtgaaatgctattggggcaaagagactcttgatatgata
aatcccgtgcaacagcagcaaaatcaaattggatatccaccagcatatggccagtggggc
cagtggtatggaaatgcacaacagattggccagtatgtgcctaatggttggcaagtacct
gcctatggaatgtatggccagccgtggagccagcagggattcaatcagacccagtcttct
gcaccatggatgggacccaattacagtgtgccgccacctcaaggccaaaatggcagcatg
cttcctaatcagcctgctgggtatcgagtggcagggtatgaaacccagtga
DBGET
integrated database retrieval system
