KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102921784
Entry
102921784         CDS       T11302                                 
Symbol
Rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03010  Ribosome
pmav05162  Measles
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    102921784 (Rack1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    102921784 (Rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmav03019]
    102921784 (Rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmav04147]
    102921784 (Rack1)
Messenger RNA biogenesis [BR:pmav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102921784 (Rack1)
Exosome [BR:pmav04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102921784 (Rack1)
  Exosomal proteins of colorectal cancer cells
   102921784 (Rack1)
  Exosomal proteins of bladder cancer cells
   102921784 (Rack1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DSE1_N Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 TRM82_WD ANAPC4_WD40 Beta-prop_Aladin ASA1 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_HPS5 PAC11 CFAP251_N Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Cytochrom_D1 Tricorn_2nd Beta-prop_pof12 WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 102921784
NCBI-ProteinID: XP_006987200
Ensembl: ENSPEMG00000011124
UniProt: A0A6I9M407
LinkDB
Position
8:33012106..33017166
AA seq 317 aa
MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI
VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA
GYTDNLVRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacccttcgtgggaccctcaaaggccataacggctgggtaacacag
atcgccaccaccccgcagttcccggacatgatcctgtccgcgtctcgagacaagaccatc
atcatgtggaagctgactagggacgagaccaactatggcatcccacagcgtgctctgcga
ggtcactcccactttgttagtgatgttgttatctcctctgatggccagtttgccctctca
ggctcctgggatggaacactgcgcctctgggatctcacaacgggcaccaccacgagacga
tttgtaggccatactaaggatgtgctgagcgttgccttctcctctgacaaccggcagatt
gtctctggatcccgagacaagaccataaagttatggaatactctgggtgtctgcaagtac
actgtccaggatgagagtcattcagaatgggtgtcttgtgtccgcttctctccgaacagc
agcaaccctatcatcgtctcctgtggatgggacaagctggtcaaggtatggaatttggct
aactgcaagctgaagaccaaccacattggccacactggctatctgaacacagtgacagtc
tctccagatggatccctctgtgcttctggaggcaaggatggccaggccatgctgtgggat
ctcaatgaaggcaagcacctttacacactggatggtggggacatcatcaatgccttgtgt
ttcagccccaaccgctactggctctgtgctgccaccggccccagtatcaagatttgggac
ttggaaggcaagatcatagtagatgaactgaagcaagaagtcatcagcaccagcagcaag
gcagagccaccccaatgcacctccctggcatggtctgctgatggccagactctgttcgct
ggttacacagacaacctggtgcgagtgtggcaagtgacgattggtacccgctaa

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