Peromyscus maniculatus bairdii (prairie deer mouse): 102921813
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Entry
102921813 CDS
T11302
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04066
HIF-1 signaling pathway
pmav04137
Mitophagy - animal
pmav04140
Autophagy - animal
pmav04148
Efferocytosis
pmav04659
Th17 cell differentiation
pmav04919
Thyroid hormone signaling pathway
pmav05167
Kaposi sarcoma-associated herpesvirus infection
pmav05200
Pathways in cancer
pmav05205
Proteoglycans in cancer
pmav05208
Chemical carcinogenesis - reactive oxygen species
pmav05211
Renal cell carcinoma
pmav05230
Central carbon metabolism in cancer
pmav05231
Choline metabolism in cancer
pmav05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
102921813 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102921813 (Hif1a)
04137 Mitophagy - animal
102921813 (Hif1a)
04148 Efferocytosis
102921813 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102921813 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102921813 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102921813 (Hif1a)
05205 Proteoglycans in cancer
102921813 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
102921813 (Hif1a)
05230 Central carbon metabolism in cancer
102921813 (Hif1a)
05231 Choline metabolism in cancer
102921813 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
102921813 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
102921813 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
102921813 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102921813 (Hif1a)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102921813 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
102921813
NCBI-ProteinID:
XP_006992795
LinkDB
All DBs
Position
14:46085562..46135231
Genome browser
AA seq
832 aa
AA seq
DB search
MEGAGGENEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTE
TEDQQLEDVPLYNDVMFPSNNEKLTNINLAMSPLPASETPKPLRSSADPALNQEVALKLE
PSPESLELSFTMPQIPDQPTSPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSVSTVTVF
QQTQLQKPTITAAAATPATTTTTAPTDEVKAVTKDTLEDIKILIASPPSTPVPQETTAAP
APAYSAPHSRTASPDRAGKRVREHTEKAHPRSPNGSVTLSQRNTVPEEELNPKIIALQNA
QRKRKMEQDGSLFQAAGIVSGTLLQQPGDRAPAASLSWKRVKGCKSSEQSGMEQKTIILI
PSDLACRLLGQSMDQSGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgagaacgagaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtctagagatgcagcaagatctcggcgaagcaaagagtccgaagttttttatgag
cttgctcatcagctgccacttcctcacaatgtgagctcacatcttgataaagcttctgtt
atgaggctcaccatcagttacttacgtgtgaggaaacttctggatgctggtgatctggac
attgaagatgaaatgaaagcacagatgaactgcttctatttgaaagccctggatggcttt
gttatggtgctcacagacgatggtgacatgatttacatttctgataacgtcaacaaatac
atggggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggcccagtgaaaaaaggtaaa
gaacaaaacacccaacgaagcttttttctcagaatgaaatgtaccctaactagccggggg
agaacaatgaacataaagtctgcgacgtggaaggtgcttcactgcacaggccatattcac
gtatatgataccaacagtaaccaacctcagtgtgggtacaagaaaccacccatgacatgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgagttgatgggttatgagccagaagaacttttgggccgctcaatttatgaatattat
catgctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaa
gtcaccacaggacagtacagaatgcttgccaaaagaggtggatatgtctgggttgaaact
caagcaactgtcatatataatacgaagaactctcagccacagtgcatcgtgtgtgtgaac
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagtggaa
tcagaggataccagctgcctctttgataagcttaagaaagaacccgatgctctgactctg
ctggccccggctgctggggacacgatcatatctctggattttggcagcgatgacacagaa
actgaagaccaacaacttgaagatgttccattatataatgatgtaatgttcccatctaat
aatgaaaaattaacaaatataaatctggcaatgtctccattacctgcctctgaaacgcca
aagccacttcgaagtagtgctgatcctgcactgaatcaagaagtcgcattaaaattagag
ccgagtccagagtcactggaactttctttcaccatgccccagattccagatcagcccaca
agtccttctgatgggagcaccagacaaagttcacctgagcctaacagtcccagtgaatat
tgttttgatgtggatagtgatatggtcaatgtattcaagttggaactggtggaaaaactg
tttgccgaagatacagaagcaaagaatccattttcaactcaggacaccgatttagacttg
gagatgctggccccttatatcccgatggatgatgatttccagttgcgttccttcgatcag
ttgtcgccattagagagcagttcctctagccctccaagtgtcagcacagttacagtgttc
cagcagacccagctacagaaacccaccattactgccgctgctgccacacctgccaccacc
accactactgcccccactgatgaagtgaaagcagtgacgaaggacactctggaagacatt
aaaatactgattgcatctccaccttccacccctgtacctcaagaaacaacagctgctcca
gcaccagcatacagtgctcctcacagtcggacagcctcaccagacagagcagggaagaga
gtcagagaacacacagagaaagctcatccaaggagcccgaacggatctgtcactttgagt
caaagaaatactgttcctgaggaagaattaaacccaaagataatagctttgcagaatgcc
cagagaaagcgaaaaatggaacaagatggctcccttttccaagcagcgggaattgtgagt
ggaacgttattgcagcagccaggtgaccgtgctcccgctgcgtcactttcttggaaacgt
gtgaaaggatgcaaatcaagtgaacagagtggaatggagcaaaagacaattattttaata
ccctctgatttagcatgcagactgctggggcaatcaatggatcagagtggattaccacag
ctgaccagttatgattgtgaagttaatgctcccatacaaggcagcagaaacctactgcag
ggtgaagaattactcagagctttggatcaagttaactga
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