Peromyscus maniculatus bairdii (prairie deer mouse): 102921980
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Entry
102921980 CDS
T11302
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102921980 (Rbm39)
Spliceosome [BR:
pmav03041
]
Common components
Common spliceosomal components
General mRNP proteins
102921980 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
102921980
NCBI-ProteinID:
XP_076427119
Ensembl:
ENSPEMG00000021887
LinkDB
All DBs
Position
4:complement(135588842..135626890)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagccgtagtcatgagcgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagagaggaaaaagagcaaaagccgggaacggaaacgaagtagaagcaaagaacggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactccagaggaaagagatgcaaggacagttttctgcatgcagctg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggaa
tttgttgatgttagttcagtgcctctagcaattggattaactggccagcgtgttttagga
gtgccaattatagtacaagcatcccaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctatgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaacaggtcgatctaagggatatggattcattacattttctgat
tcagaatgtgccaaaaaagctctggagcagcttaatggatttgaactagctgggaggcca
atgaaagttggtcatgttactgaacggactgatgcttctagtgctagttcatttttggac
agtgatgaactagaaaggactggaattgacttgggaacaactggtcgtctccaattgatg
gcgagacttgcagagggtacaggattgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctcagctttagctgcagctgcatctgttcagcca
ctggcaacacagtgtttccagctttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattgcatggcagatggtttgctggtaaaatg
ataactgcagcgtatgtacctctcccaacttaccacaacctctttccggattctatgaca
gcaacacaactactggttccaagtagacgatga
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