Peromyscus maniculatus bairdii (prairie deer mouse): 102922074
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Entry
102922074 CDS
T11302
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102922074
03015 mRNA surveillance pathway
102922074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102922074
03041 Spliceosome [BR:
pmav03041
]
102922074
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102922074
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102922074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102922074
NCBI-ProteinID:
XP_076416439
LinkDB
All DBs
Position
23:36925920..36929810
Genome browser
AA seq
906 aa
AA seq
DB search
MDAGFLRRTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDAVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKREPSRSPRRRKSRSP
SPRRRSSPVRRERKLSHSQSPRHRTKSRSPSPAPEKKEKSPELPEPSVRTKDSSVQEATS
TSDILKSPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRSNPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRQRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAXKPRKVELSESEDKGNKMAVADSVQQRR
QYRRQNQQSSSDSGSSSTSEDEQPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKESSPR
GRRRRSPSPPPARRRQSPSPAPPPSPPLLLGRRRSPTPPPRRRTPSPPPRRRSPSPRRYS
PPIQRRYFPSPPPKRRTASPPPQPKQRASPSPPPKRRVSHSPPPKQRIPPVTKRRSPSLS
SKHRKGASPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVQRGASASPQGRQSPSPST
GPIRRVSRTPEPKKIXKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPST
NWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHNKHKKHKKEKAVA
VATAAPAAPAAVSAATTTSAQEEPAAAPEPRKETEGEAEDNLDDLERHLREKALRSMRKA
QVSPQS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttacgcagaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaagctcctcaagcagctgaaattcgcagaatgtctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgctgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaacgggaaaaacgctcgagaa
ttcatgggagagctgtggcccctgctgttgagtgcacaagagaacatcgctgggatcccc
tctgctttcctagagttgaagaaggaagaaatcaaacagagacaaatcgaacaagaaaag
ttggcatctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaagag
agcagcagagagaaaagggagccgtctcgcagcccacggagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagctcagtcactctcaatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggagaaatct
ccagagctcccggaaccatcagtgagaacaaaagactcttcagtacaggaggccacgtct
acaagtgacatcctgaaatctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaggaaaagactagaccaagatcgcgatcacgttcc
aaatcacgatctcggacccgttctcgatcaccttctcatactagaccaagacggcgacat
agatcccgatcaaggtcttactctcctagaaggcggtcaaacccaagaaggcgaccatct
cctcgaagaagaactccaccaagacggatgccccctccaccaagacacaggaggagtagg
tctccaggccgacaaaggaggcgctcttccgcatcgttgtctggaagtagctcttcgtcc
tcttcatctcgttcccggtcaccaccaaagaagcctcccaagaggacatccagcccccct
cgaaaaacgagaaggttatctccttcagcaagtcctcctaggcgaaggcacaggccatca
tctccagcaactccaccacctaaaactcgccattccccaaccccccagcagtcgaaccgt
acaagaaaaagtcgagtttctgtgtctccaggaagaacttcgggtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttcaccagcanncaagccgagaaaagtggagttg
tctgagtctgaagacaaaggcaacaagatggctgtagcggattctgtgcagcagaggcgc
cagtatagacgacagaaccagcagtcttcatctgactctggctcctcttccacctcagaa
gatgagcagcccaagagatcccatgtgaagaatggtgaggtaggcaggcggcggagacat
tccccctctcggagtgcctctccatcacctcgaaagcgccagaaagagtcttctcctcgt
ggtagaaggaggagaagtccctctccaccaccagccagaaggcgacaatctccttctcca
gctcctcctccttccccccccctcctcctcgggcggcgcagatctcccaccccaccacca
cgacgaaggactccttctcctcccccacgccgccgctcaccttctccaagaagatactct
cctcccatccagaggagatactttccttccccacctccaaagaggagaaccgcctcaccc
ccaccccagcccaagcaaagggcatcaccatctccaccaccaaagcgccgggtctcccac
tctccacctcccaaacagagaatccccccagtcaccaagagacgttcgccctccttatct
tcaaagcataggaaaggggcttccccaggccgctccacccgagaggcccggtcaccacaa
ccaaacaaacggcattcgccctcaccacgtcctcgagctcctcagacctcaagtcctccc
cctgttcaaagaggagcatcagcatcaccccaaggaaggcagtccccatctccaagtact
gggcccattaggagagtctccaggactccggagcctaagaagatttaaaaggctgcctca
ccaagccctcagtccgtaagaagggtctcctcttcccgatctgtctctggatctcctgag
ccagcagctaaaaagcctccagcacctccatctcctgtccagtctcagtcaccctccaca
aactggtcgcccgcagtaccagtcaaaaaggctaaaagcccaacaccaagcccgtcccct
gccaggaattctgatcaagaaggaggtgggaagaagaagaagaagaaaaaggacaagaaa
cacaaaaaggataagaaacacaacaagcacaaaaaacacaagaaggagaaggctgtggct
gtggccactgcagctcctgcagcccctgcagccgtttctgctgccaccaccacatcagca
caggaagagcctgcggcagcacctgagcccaggaaggagactgagggtgaagctgaggac
aaccttgatgacctcgaaaggcacctgagggagaaggccctgcggtccatgcggaaggct
caagtgtccccacagtcctag
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