KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102922508
Entry
102922508         CDS       T11302                                 
Symbol
Nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav01523  Antifolate resistance
pmav04010  MAPK signaling pathway
pmav04014  Ras signaling pathway
pmav04024  cAMP signaling pathway
pmav04062  Chemokine signaling pathway
pmav04064  NF-kappa B signaling pathway
pmav04066  HIF-1 signaling pathway
pmav04071  Sphingolipid signaling pathway
pmav04151  PI3K-Akt signaling pathway
pmav04210  Apoptosis
pmav04211  Longevity regulating pathway
pmav04218  Cellular senescence
pmav04380  Osteoclast differentiation
pmav04613  Neutrophil extracellular trap formation
pmav04620  Toll-like receptor signaling pathway
pmav04621  NOD-like receptor signaling pathway
pmav04622  RIG-I-like receptor signaling pathway
pmav04623  Cytosolic DNA-sensing pathway
pmav04625  C-type lectin receptor signaling pathway
pmav04657  IL-17 signaling pathway
pmav04658  Th1 and Th2 cell differentiation
pmav04659  Th17 cell differentiation
pmav04660  T cell receptor signaling pathway
pmav04662  B cell receptor signaling pathway
pmav04668  TNF signaling pathway
pmav04722  Neurotrophin signaling pathway
pmav04917  Prolactin signaling pathway
pmav04920  Adipocytokine signaling pathway
pmav04926  Relaxin signaling pathway
pmav04931  Insulin resistance
pmav04932  Non-alcoholic fatty liver disease
pmav04933  AGE-RAGE signaling pathway in diabetic complications
pmav04936  Alcoholic liver disease
pmav05010  Alzheimer disease
pmav05022  Pathways of neurodegeneration - multiple diseases
pmav05030  Cocaine addiction
pmav05132  Salmonella infection
pmav05133  Pertussis
pmav05134  Legionellosis
pmav05135  Yersinia infection
pmav05140  Leishmaniasis
pmav05142  Chagas disease
pmav05145  Toxoplasmosis
pmav05146  Amoebiasis
pmav05152  Tuberculosis
pmav05160  Hepatitis C
pmav05161  Hepatitis B
pmav05162  Measles
pmav05163  Human cytomegalovirus infection
pmav05164  Influenza A
pmav05165  Human papillomavirus infection
pmav05166  Human T-cell leukemia virus 1 infection
pmav05167  Kaposi sarcoma-associated herpesvirus infection
pmav05168  Herpes simplex virus 1 infection
pmav05169  Epstein-Barr virus infection
pmav05170  Human immunodeficiency virus 1 infection
pmav05171  Coronavirus disease - COVID-19
pmav05200  Pathways in cancer
pmav05202  Transcriptional misregulation in cancer
pmav05203  Viral carcinogenesis
pmav05206  MicroRNAs in cancer
pmav05207  Chemical carcinogenesis - receptor activation
pmav05208  Chemical carcinogenesis - reactive oxygen species
pmav05212  Pancreatic cancer
pmav05215  Prostate cancer
pmav05220  Chronic myeloid leukemia
pmav05221  Acute myeloid leukemia
pmav05222  Small cell lung cancer
pmav05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
pmav05321  Inflammatory bowel disease
pmav05415  Diabetic cardiomyopathy
pmav05417  Lipid and atherosclerosis
pmav05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102922508 (Nfkb1)
   04014 Ras signaling pathway
    102922508 (Nfkb1)
   04064 NF-kappa B signaling pathway
    102922508 (Nfkb1)
   04668 TNF signaling pathway
    102922508 (Nfkb1)
   04066 HIF-1 signaling pathway
    102922508 (Nfkb1)
   04071 Sphingolipid signaling pathway
    102922508 (Nfkb1)
   04024 cAMP signaling pathway
    102922508 (Nfkb1)
   04151 PI3K-Akt signaling pathway
    102922508 (Nfkb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102922508 (Nfkb1)
   04218 Cellular senescence
    102922508 (Nfkb1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102922508 (Nfkb1)
   04620 Toll-like receptor signaling pathway
    102922508 (Nfkb1)
   04621 NOD-like receptor signaling pathway
    102922508 (Nfkb1)
   04622 RIG-I-like receptor signaling pathway
    102922508 (Nfkb1)
   04623 Cytosolic DNA-sensing pathway
    102922508 (Nfkb1)
   04625 C-type lectin receptor signaling pathway
    102922508 (Nfkb1)
   04660 T cell receptor signaling pathway
    102922508 (Nfkb1)
   04658 Th1 and Th2 cell differentiation
    102922508 (Nfkb1)
   04659 Th17 cell differentiation
    102922508 (Nfkb1)
   04657 IL-17 signaling pathway
    102922508 (Nfkb1)
   04662 B cell receptor signaling pathway
    102922508 (Nfkb1)
   04062 Chemokine signaling pathway
    102922508 (Nfkb1)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102922508 (Nfkb1)
   04917 Prolactin signaling pathway
    102922508 (Nfkb1)
   04926 Relaxin signaling pathway
    102922508 (Nfkb1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    102922508 (Nfkb1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    102922508 (Nfkb1)
  09149 Aging
   04211 Longevity regulating pathway
    102922508 (Nfkb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102922508 (Nfkb1)
   05202 Transcriptional misregulation in cancer
    102922508 (Nfkb1)
   05206 MicroRNAs in cancer
    102922508 (Nfkb1)
   05207 Chemical carcinogenesis - receptor activation
    102922508 (Nfkb1)
   05208 Chemical carcinogenesis - reactive oxygen species
    102922508 (Nfkb1)
   05203 Viral carcinogenesis
    102922508 (Nfkb1)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    102922508 (Nfkb1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    102922508 (Nfkb1)
   05221 Acute myeloid leukemia
    102922508 (Nfkb1)
   05220 Chronic myeloid leukemia
    102922508 (Nfkb1)
   05215 Prostate cancer
    102922508 (Nfkb1)
   05222 Small cell lung cancer
    102922508 (Nfkb1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102922508 (Nfkb1)
   05170 Human immunodeficiency virus 1 infection
    102922508 (Nfkb1)
   05161 Hepatitis B
    102922508 (Nfkb1)
   05160 Hepatitis C
    102922508 (Nfkb1)
   05171 Coronavirus disease - COVID-19
    102922508 (Nfkb1)
   05164 Influenza A
    102922508 (Nfkb1)
   05162 Measles
    102922508 (Nfkb1)
   05168 Herpes simplex virus 1 infection
    102922508 (Nfkb1)
   05163 Human cytomegalovirus infection
    102922508 (Nfkb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    102922508 (Nfkb1)
   05169 Epstein-Barr virus infection
    102922508 (Nfkb1)
   05165 Human papillomavirus infection
    102922508 (Nfkb1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102922508 (Nfkb1)
   05135 Yersinia infection
    102922508 (Nfkb1)
   05133 Pertussis
    102922508 (Nfkb1)
   05134 Legionellosis
    102922508 (Nfkb1)
   05152 Tuberculosis
    102922508 (Nfkb1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102922508 (Nfkb1)
   05145 Toxoplasmosis
    102922508 (Nfkb1)
   05140 Leishmaniasis
    102922508 (Nfkb1)
   05142 Chagas disease
    102922508 (Nfkb1)
  09163 Immune disease
   05321 Inflammatory bowel disease
    102922508 (Nfkb1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102922508 (Nfkb1)
   05022 Pathways of neurodegeneration - multiple diseases
    102922508 (Nfkb1)
  09165 Substance dependence
   05030 Cocaine addiction
    102922508 (Nfkb1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102922508 (Nfkb1)
   05418 Fluid shear stress and atherosclerosis
    102922508 (Nfkb1)
   05415 Diabetic cardiomyopathy
    102922508 (Nfkb1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    102922508 (Nfkb1)
   04932 Non-alcoholic fatty liver disease
    102922508 (Nfkb1)
   04931 Insulin resistance
    102922508 (Nfkb1)
   04933 AGE-RAGE signaling pathway in diabetic complications
    102922508 (Nfkb1)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    102922508 (Nfkb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmav03000]
    102922508 (Nfkb1)
Transcription factors [BR:pmav03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    102922508 (Nfkb1)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_4 Ank_3 Ank_5 Death
Other DBs
NCBI-GeneID: 102922508
NCBI-ProteinID: XP_076431148
Ensembl: ENSPEMG00000011360
LinkDB
Position
6:complement(115083057..115200175)
AA seq 969 aa
MADDDPYGTGQMFHLNPALPHPMFNTELYQPEMPMSTDGPYLQILEQPKQRGFRFRYVCE
GPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGI
CTVVAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSELAYLQAEG
GGDRQLTDREKEIIRQAAVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDS
KAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSP
TDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRK
RQKLMPNFSDSFGGGSGAGAGGGGMFGSGGGGGSTGSPGPGYGFSHYGFPAYSGITFHPG
ATKSNAGITHGTINTDLKNNPKDESGEGEILNVSEKETAAEDKEPGMSSTKTDTVALTST
VEDKEWDAGFQDNLFLEKALQLAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDENGDSV
LHLAIIHLHAQLVRDLLEVTSGLICDDIINMRNDLYQTPLHLAVITKQEDVVEDLLRVGA
DLSLLDRWGNSVLHLAAREGHDKILSVLLKNRKAALLIDHPNGEGLNAIHIAVMSNSLPC
LLLLVAAGAEVNAQEQKSGRTALHLAVEYDNISLAGCLLLEGDAHVDSTTYDGTTPLHIA
AGRGSTRLAALLKAAGADPLVENFEPLYDLDDSWEQSGEDEGVVPGTTPLDMAANWQVFD
ILNGKPYERVFTSDDILPQGDMKQLTEETRLQLYKLLEIPDPDKNWATLAQKLGLGILNN
AFRLSPAPSKTLMDNYEVSGGTIKELMEALRQMGYTEAIEVIQAAFCTPETTASSPVTTA
QAHLLPLSSSSTRQHIDELRDNDSICDSGVETSFRKLSFTESLPGDSSLLSLNKIPHNYG
QEGPIEGKI
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggcggacgatgatccatacggaactgggcaaatgtttcatttgaatcctgctttgcct
catccaatgtttaatacagaattatatcaaccagaaatgccaatgtcaacagatggtcca
taccttcaaatattagagcaaccaaaacagaggggatttcgattccgctacgtttgtgaa
ggcccatcacatggtggactccctggtgcctctagtgagaagaacaagaaatcctaccct
caggtcaaaatttgcaactatgtgggacctgcaaaggttattgttcaattggtcacaaat
ggaaaaaatatccacctgcatgcccacagcctggtgggaaaacactgtgaggatgggatc
tgcactgtggtagctggacccaaggacatggtggttggctttgccaacctgggaatactt
catgtaactaagaaaaaggtatttgaaacactggaagcgcggatgacagaggcgtgtata
aggggctataatcctggactcttggtgcattctgagcttgcctacctacaagccgagggt
ggaggagaccggcagctcacagacagggagaaggagatcatccgccaggcggctgtgcag
cagacgaaggagatggacctgagtgtggtacgcctcatgttcacagcctttcttcccgac
agcacgggcagcttcacccggagactggagcccgtggtatcagatgccatctatgacagc
aaggcccccaacgcatccaacctgaaaatcgtaagaatggacaggacagcaggatgtgta
actggaggagaagaaatttaccttctctgcgacaaggttcagaaagatgacatccagatt
cggttctatgaagaggaagaaaatggtggagtttgggaaggatttggagacttttccccc
acggatgtccatagacagtttgccattgtcttcaaaactccaaagtataaggatgtcaac
atcacaaagccagcttccgtattcgttcagcttcggaggaaatcggatctggaaactagt
gaaccgaaacccttcctctactaccctgaaatcaaagacaaagaggaagtgcagaggaag
cgccagaagctcatgcccaacttctcggacagcttcggcggtggcagtggagccggagct
ggcggtggaggcatgtttggtagtggcggcggtggagggagtaccggaagtcccggccca
gggtatggcttctcgcactacggatttcctgcttacagtgggattacattccatccggga
gccactaaatccaacgctgggatcacccatggaaccataaacacggacttgaaaaataac
cctaaagacgagagtggtgagggagagattctaaatgtctctgagaaggaaacagcagca
gaagataaggaacctggcatgtccagcaccaagactgatacagttgcactgacgtccacc
gtggaggacaaggaatgggatgctgggtttcaggataacctctttcttgagaaggctctg
cagctcgccaagcggcatgccaatgcccttttcgactacgcggtgacaggggacgtgaag
atgctgctggctgtgcagcgccatctcaccgcggtgcaggatgagaatggggacagtgtc
ttacacttagccatcatccaccttcatgctcagcttgtgagggatctactggaagtcacg
tctggtttgatctgtgatgacatcatcaacatgagaaatgatctgtatcagacacctttg
cacttggccgtcatcaccaagcaggaagatgtggtggaggacttgctgagggttggagct
gacctgagccttctggaccgctggggtaactctgttctgcacctagctgccagagaagga
cacgataagatcctgagtgtcctgctcaagaacaggaaagcagcactccttatcgaccac
cccaacggggaaggtctaaatgccattcacatagctgtgatgagcaatagcctgccatgt
ctgctgctgcttgtggctgccggggcagaggtcaatgctcaggagcagaagtctgggcgc
acagcactgcacctggccgtggagtacgacaacatctccttggctggctgcctgcttctg
gagggcgatgcccacgtggacagtaccacctatgatgggaccacacctctacatatagca
gctggaagagggtccaccagactggcagctcttctcaaagcagcaggagcagaccccctg
gtggagaactttgagcctctctatgacctggacgactcgtgggagcagtctggagaggat
gagggggtggtgccaggcaccacccccctggacatggctgccaactggcaggtgtttgac
atactaaatgggaagccatatgagcgtgtgttcacatctgatgacatactaccccaaggg
gacatgaaacagctaacagaagagacgaggctacagctctacaagctgctggagatccct
gatccagacaaaaactgggccactctggctcagaagttaggtctggggatacttaataac
gccttccggctgagtcctgctccttctaaaacgcttatggacaactatgaggtctctggg
ggcaccatcaaagagctgatggaggccctgcgacagatgggctacacagaggccattgaa
gtgatccaggcagccttctgcaccccggaaaccacagcctccagccccgtgaccactgct
caggcccacctgctgcctctctcatcttcctccaccaggcagcacatagatgagctccgt
gacaatgacagcatctgtgacagtggtgtggagacatccttccgcaaactcagcttcaca
gagtctttgcctggagacagctcactgctatctctaaacaaaataccccacaattatggg
caggaaggacctatagaaggcaaaatttag

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