Peromyscus maniculatus bairdii (prairie deer mouse): 102922589
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Entry
102922589 CDS
T11302
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102922589 (Robo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102922589 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmav04515
]
102922589 (Robo1)
Cell adhesion molecules [BR:
pmav04515
]
Immunoglobulin superfamily
ROBO family
102922589 (Robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
102922589
NCBI-ProteinID:
XP_015857644
Ensembl:
ENSPEMG00000009052
LinkDB
All DBs
Position
12:61683343..62681295
Genome browser
AA seq
1656 aa
AA seq
DB search
MKWKHLPLLVMISLLILSRKHLLLAQLIPDPEDLERGHDNGTPAPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSTSRFSVSQTGDLTITNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATG
SPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCTASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNTVTLSWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGSSHSE
SEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPR
SVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIP
SLVPGVRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPATQPWLADTWPNTGNHHNDCSINCCTASNGNSDSNLTTYSRPADCIANYN
SQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQ
ANLSNNMNNGGGGGGGGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPT
IPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQGGMNWADLLPPPPAHPPP
HSNSEEYSLSVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSY
SHQSTATLTPSPQEELQPMLQDCPEDMGHMAHQPDRRRQPVSPPPPPRPISPPHTYGYIS
GPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWG
SASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHAS
QCPRPTSPVSTDSNMSTAVIQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTV
QSKAQLEVRPVMVPKIASIEARTDRSSDRKGGSYKAREALDGRQVPDLRTNPGDPREAQE
QQNEGKGRGNKAAKRDLPPAKTHLVQEDIPPYCRPTFPTSNNPRDPSSSSSMSSRGSGSR
QREQANVGRRNMAEMQVLGGYERGDDNNEELEETES
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatcttcctcttctggtcatgatatcactcctcattctgtcaagaaag
catctccttctggcccagcttatcccagaccctgaggacctagagaggggccacgacaac
gggacgccagcccccacctctgataatgatgacaattcgctgggctacacaggctcccgt
cttcgtcaggaagatttcccacctcgcattgttgagcacccttcggatctcattgtctcg
aaaggagagcctgccactttgaactgtaaagctgaaggtcgccccaccccgaccatcgag
tggtacaaaggcggggaaagagtggagacagacaaggatgaccctcgctcgcaccggatg
ttgctgccaagcggatctttatttttcttacgtatagtacatggacggaagagtcggccc
gacgaaggggtctacatctgtgtagcgaggaattacctcggagaggctgtgagccacaac
gcgtcgctggaggtagctatactacgggatgacttcagacaaaacccttcagatgtgatg
gtggctgtaggtgagcctgcagtaatggaatgccagcctcctcggggccacccagagccc
accatctcctggaaaaaggatggctcacccctggatgataaagatgaaagaatcactata
cgaggaggaaagctcatgatcacttacacccgtaagagcgatgctggcaagtacgtctgt
gtcggtaccaacatggtaggggaacgcgagagtgaggttgcagagctcactgtcttagag
agaccatcatttgtgaagagacccagtaacttggcagtaactgtggatgacagtgcagaa
tttaaatgcgaggcccgaggagaccctgtgcctacggttcgatggaggaaagatgatgga
gagctgcctaaatccagatatgaaatccgagatgatcatactttgaaaattcggaaggtg
atggctggtgatatgggatcatacacttgtgtggcagaaaatatggttgggaaagctgaa
gcatcagccactctgacagttcaagagccgccacattttgttgtgaagccccgtgaccag
gttgttgccttgggacgaactgtgacttttcagtgtgaagcaactggcaaccctcaaccg
gctatcttttggaggcgagaggggagtcagaatctgcttttctcataccagccaccccag
tcaaccagccggttttcagtgtcccagactggggatctcactattactaacgtgcagcgg
tctgatgttggttactatatttgtcagactttaaatgttgctggaagtatcatcacaaag
gcatatttggaagtgactgatgtgattgcagaccggcctcccccagtcattcgacaaggt
cccgtgaatcagacggtagcagtggatggtactttagtcctcagctgtgtggccacaggc
agcccagtgcccacaattctatggaggaaggatggagtccttgtttcaacccaagattct
cggatcaaacagctggagactggcgtgctgcagatccgctacgctaagctgggtgacact
ggtcgatacacctgtactgcatcaacccccagtggtgaggccacatggagtgcttacatt
gaagtgcaggagtttggagttccagttcaacctccaagacccaccgaccccaatttaatc
cccagcgccccctcaaagcctgaagtcacagatgtcagcaaaaacacagtaactttatca
tggcagccaaacttgaactcaggagcaaccccaacgtcttatattatagaagccttcagc
catgcatcaggtagcagctggcagactgtggcagaaaatgtgaaaacagaaacatttgcc
atcaaaggactcaaacctaatgcaatataccttttcctggtgagggcagctaatgcatat
ggaattagtgatccaagccaaatatcagatccagtgaaaacacaagatgtcccaccaacc
agtcaaggggtggaccacaagcaggtccagagagagctggggaatgtcgtcttgcacctc
cacaaccccaccatcctctcttcctcgtcagtggaagtacactggacagtggaccagcaa
tctcagtatattcaaggatataaaattctctatcggccatctggatccagccacagtgaa
tctgagtggttagtttttgaagtgaggaccccaaccaaaaatagtgtggtgatccctgat
ctcagaaaaggcgtcaactatgagattaaggctcgcccattttttaatgagtttcaagga
gcagacagtgaaatcaaatttgccaaaaccttagaagaagcaccaagtgcccctccccga
agtgtgaccgtatcaaaaaatgatggaaacggtacggcaatccttgtctcgtggcagcca
cctcctgaagatactcagaatggaatggttcaagaatataaggtttggtgtctagggaat
gaaactaggtatcacatcaacaagacagtcgacggctctaccttttcggtggtcatcccc
tcgctggttcctggggtccgctacagtgtggaggtggcggcaagcacaggggccggtcct
ggggtcaagagtgagcctcagttcatccagctggattctcatggaaaccccgtgtctccc
gaggaccaagtgagcctcgctcagcagatctccgatgtggtgaagcagccagcgttcatc
gcaggcatcggggcagcctgttggattatcctcatggtcttcagcatctggctttacagg
caccgcaagaagaggaacgggctcaccagcacgtacgcgggcatcaggaaagtcccgtcc
tttaccttcacaccaacagtaacttatcaaagaggaggcgaagccgtcagcagtggaggg
aggccgggacttctcaacatcagtgagcctgccacgcagccttggctggcagacacgtgg
cccaacactgggaaccatcacaatgactgctccatcaactgctgtacagcgagcaatggg
aacagcgacagtaacctgacaacctacagtcgcccagctgattgtatagcaaattataac
agccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtttatggtgat
gtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggac
gggcgttttgtcaatccatcagggcagcccaccccttatgctaccacgcagctcatccag
gccaacctcagcaacaatatgaacaatggcggcggtggcggcggaggcggggactccagc
gagaaacactggaagccgcctggccagcagaaacaggaagtggcacccattcagtataac
atcatggagcaaaacaagctgaacaaagattatcgggcaaatgacacaatccccccaacc
attccgtacaaccaatcctatgaccagaacacaggaggctcttacaacagctcggatcgg
ggcagtagcacgtctgggagtcaagggcataagaaaggggcgcggacaccgaaggccccc
aagcagggcggaatgaactgggcagacttgcttccccctcccccagcgcatcctccccca
catagcaacagcgaagagtacagcctgtcggtagatgagagctatgaccaagaaatgccg
tgtcctgtgccgcccgcaaggatgtatctgcagcaggatgagttagaagaagaggaggat
gaaagaggccccaccccccctgttcggggggcagcttcttctccagctgctgtgtcctac
agccatcagtccacagccacgctcaccccttcgccccaggaagaactccaacccatgtta
caggattgtccagaggacatgggccacatggcccaccaaccagacaggaggcggcagccc
gtgagtccccctccgccaccacggccaatctccccgccgcatacttacggctacatttca
ggaccgctcgtctccgacatggatacagatgctccagaagaggaggaagacgaggctgac
atggaagtggccaaaatgcaaaccagaaggctcttgttgcgtggccttgagcagacccca
gcctccagtgtgggggaccttgagagctctgtcacggggtccatgatcaatggctggggc
tcagcctccgaagaggacaacatttcgagtgggcgctccagtgttagttcctctgatggc
tcctttttcactgacgctgattttgcccaggccgtcgctgcagccgcagagtatgccggc
ctgaaagttgctaggcgccaaatgcaggatgcggccggccgccgccatttccacgcctct
cagtgccctcggcccacgagccctgtgtctacggacagtaacatgagtactgctgtaatc
cagaaaaccagacccgccaagaaacagaaacaccagccaggacatctgcgcagagaagcc
tacacagacgatcttccaccccctccggtaccaccacctgctataaaatcgcccactgtg
cagtccaaggctcagctggaggtacggcctgtcatggtgcccaagatcgcctctatagaa
gcaagaacagacagatcatcggacagaaaaggaggcagttacaaggcgagagaggcattg
gatggacgacaagtccctgacctgcgaacaaacccaggtgaccccagagaagcacaggaa
cagcaaaatgaagggaaaggacggggaaacaaggcggcaaagagagaccttcctccagcc
aagacgcacctggtccaagaggatattccaccgtactgtagacctactttccctacgtca
aacaaccccagagatcctagttcctcaagctcaatgtcatcacgaggatcaggaagccga
caaagagagcaagcaaacgtaggtcgaagaaatatggcagaaatgcaagttcttggggga
tatgaaagaggagatgataataatgaagaattagaggaaaccgaaagctga
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integrated database retrieval system
