Peromyscus maniculatus bairdii (prairie deer mouse): 102922601
Help
Entry
102922601 CDS
T11302
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102922601 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102922601 (Edc4)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102922601 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
102922601 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102922601
NCBI-ProteinID:
XP_006986887
Ensembl:
ENSPEMG00000004965
UniProt:
A0A6I9M3C8
LinkDB
All DBs
Position
5:38757110..38770634
Genome browser
AA seq
1405 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGSSAENQRPSSAYNGDLNGLLVPDPLSSGDSNS
TSKPGIRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDALRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGAESSHGASATESTAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPAHTA
HEDFTFGESRPELGSEGLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PTASLQQISASPSSSSSSSSSSSSSSSSSSSLTAVSAVSSSSTMDPSLTSRPPEELTLSP
KLQLDGSLTINSSSSLQASPRSLLPGLLPGPADKLTPKGAGQVSTAASALSLDLQEVEPL
GLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSVPEGLIEPDSMASAASAL
HLLSPRPRQGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEVAAPDSQVWPTAPDITRE
TCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASAAGGFG
SKMPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHQVAEPPEDWPALIWQ
QQRELTELWHNQEELLQRLCAQLEGLQNTVTDHVERALETRHEQEQRRLERALAEGQQRG
GQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVASKLTV
VEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQ
INDSFRLGTQEYLQQLDSHMKSRKAREQEAREPVLAQLRGLVNTLQSATEQMAATVSSSV
RAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPS
AHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLSLVLYVCETVDPAQVFGQPPCPLSQP
VLLSLIQQLASDLGTRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAD
PHNSLGKAARRLSLMLHGLATPSLP
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcaagcatcgatatagaggacgccacgcagcatctgcgggacatcctc
aagctggaccggcccgcgggaggttccagtgcagagaaccaaaggccatccagtgcttat
aatggagacctcaatgggctcctggttccggacccactcagctcaggtgatagtaactca
acaagcaaacctggtatacggaccatgccacctattaatctgcaggaaaagcaggtcatt
tgcctgtctggagatgacagctccacttgcattgggattttggccaaggaggtagaaatc
gtggccagcagtgattccagcatttccagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtacgactgggagcagaagtactactatggcaacctgattgcagtg
tctaattccttcttggcgtatgccattagggctgccaacaatggctcagcaatggtgcgc
gtgatcagtgttagtacttcagagcggaccctgctcaagggtttcacaggcagtgtggct
gatctggctttcgcacacctcaactctccacagcttgcctgcctggatgaggctggcaat
ctctttgtgtggcgcttggctctggttaagggtaaaattcaagaagagattttagtccat
atccggcagccagagggcacgccactgaaccacttccgaaggatcatctggtgccccttc
atccctgaggaaagtgaggactgttgtgaagaaagtagcccaacagtggccctgctgcat
gaagaccgggctgaggtatgggacctggatgcgcttcgctccagccacagcacctggccc
gtggacgtcagccaaatcaagcagggcttcattgtagtgaaaggccatagcacgtgccta
agtgaaggagccctttctcctgatgggactgtcctggctactgcaagccatgacggcttt
gtcaagttctggcagatctacattgaaggtcaggatgaaccaaggtgtctgcatgaatgg
aagcctcatgacggacggcccctttcttgcctcttattctgtgataaccataagaaacag
gatcctgaggtcccgttctggaggttcctcattactggcgctgaccagaatcgggagctg
aagatgtggtgcacagtgtcctggacctgcctgcaaaccattcgtttctccccagatatc
ttcagttcagtgagtgtacctcccagcctcaaagtttgcttggacctctcagcagagtat
ctgattcttagtgatgtgcaacgaaaggtcctctatgtgatggagctgctccagaaccaa
gacgagggccgcgcttgctttagctccatctccgagttcctgctcacccaccccgtgctc
agctttggcatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcccgcc
gaggaggagaacgacagtctgggtgccgagagttcccacggagccagtgccacggaatct
acagcaggggtgcttatcaagctcttttgtgtgcatactaaggcactacaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggctccactccctgcccacactgct
cacgaggatttcacatttggagagtctcgacctgaactaggctctgaggggctggcttca
gctgctcatgggtctcagcctgacctccggcgcatcgtggaacttcctgcacctgcagac
ttcctcagtctgagcagtgagaccaagcctaagttgatgacacccgatgctttcatgacg
cccaccgcctccctgcagcagatctctgcatcccctagcagtagcagcagcagcagcagt
agcagcagcagcagcagcagcagcagcagctccctaacagctgtatctgctgtgagcagc
tcctcaaccatggacccctccttgaccagcaggccacccgaggagctcaccttgagtccc
aagctgcagctggatggcagtctgacaataaacagcagcagcagcctgcaggcaagccct
cgaagcctccttcctgggctgctcccaggcccagctgacaaattgactcccaagggagct
gggcaggtatctacagctgcctctgcactgtccttggatttgcaggaagtggagcctctg
gggctaccccaggcctctcccagtcgcacccgttcccctgatgtgatctcctcagcatcc
actgccctgtcccaggacatccctgaaatcgcctcggaggccctgtcccgtggctttggc
tcctctgttcctgagggcctcattgagccagacagtatggcctccgctgcttcagcacta
cacttactgtctcctcggcccaggcaaggccctgagcttggctctcagcttggcctggat
ggaggccctggggatggggatcggcatagtaccccctccctactggaagcagccttgacc
caggaggttgcagcccctgacagtcaagtctggcctacagcacctgacattactcgggag
acatgtagtaccttggcagaaagccccaggaatggcctccaggaaaagcacaaaagcctg
gccttccaccggccaccttaccacctactgcagcagcatgacagtcaggacactagtgct
gagcaaagtgaccatgacgatgaagttgccagccttgcttctgccgcagggggttttggc
agcaaaatgcctactccacggctccctgccaaggattggaagaccaagggatcccctcgg
acttcacccaagctcaagaggaaaagcaagaaggatgatggggattcagctgtgggatcc
cggctcacagagcaccaggtggcagagccccctgaggactggccggcattaatttggcag
cagcaaagagagctgacagaactatggcacaaccaggaagagctgctacagcgtctctgt
gcccaacttgaaggtctacagaacactgtcactgaccacgtagagcgtgccctggagacc
cggcatgagcaagagcagcggcggctggaacgagcactggctgaggggcagcagcggggt
gggcagctgcaggagcagctgacgcagcagctgtcccaggccttgtcgtcagctgtggct
gggcgcctggaacgcagtataagggatgaaatcaagaagacagttcctccatgtgtctcc
agaagtctggagcctgtggcgggtcaactaagcaactcagtggcttccaaacttacagtt
gtggaaggcagcatgaaagagaatatctctaagctactcaagtccaagaacttgacagat
gccattgcccgagcagctgcagacacattacagggaccaatgcaggctgcctaccgggaa
gccttccagagtgtggtactgccagcttttgagaagagttgccaggctatgttccagcaa
atcaatgacagctttaggctgggcacacaggaatatttgcagcagctagacagtcacatg
aagagccggaaggcacgtgaacaggaagccagggagcctgtgctggcccagcttcggggc
ctggtcaacacactgcaaagtgccactgagcagatggcggccactgtgtccagcagtgtt
cgggctgaggtgcaacaccagctgcatgtggctgtgggcagcttacaggagtccatttta
gcacaagtacaacgcattgttaagggtgaagtaagtgtggcacttaaggagcagcaggcc
accgtcacttccagcatcatgcaggccatgcgttcagctgctggcacacctgtcccttct
gctcaccttgactgccaggcccaacaagcccatatcttgcagttactgcagcagggccac
ctcaatcaggccttccagcaggccctgactgccgccgatctcagcctggtgctgtacgtg
tgtgaaactgtggacccggcccaggtgtttgggcagccgccctgtccactctcccagcct
gtgctcctttccctaatccagcagctggcatctgaccttggaactagaagtgacctcaag
ctcagctatttggaagaggctgtgatgcacctggaccacagtgatcccatcactcgagac
cacatgggctctgtcatggcccaggtacgccagaagctcttccagttcctgcaggctgat
ccacacaactcacttggcaaagctgcccggcgtctcagcctaatgttacatggccttgcg
acccctagcctcccttag
DBGET
integrated database retrieval system
