KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102923039
Entry
102923039         CDS       T11302                                 
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102923039 (Taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmav03021]
    102923039 (Taf5l)
   03036 Chromosome and associated proteins [BR:pmav03036]
    102923039 (Taf5l)
Transcription machinery [BR:pmav03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102923039 (Taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     102923039 (Taf5l)
Chromosome and associated proteins [BR:pmav03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102923039 (Taf5l)
    STAGA complex
     102923039 (Taf5l)
    TFTC complex
     102923039 (Taf5l)
    SAGA complex
     102923039 (Taf5l)
    SLIK complex
     102923039 (Taf5l)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR41 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Tricorn_2nd Beta-prop_DCAF4 Beta-prop_SPT8 RMC1_N Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_like Beta-prop_IP5PC_F PROPPIN Ge1_WD40 WD_LRWD1 Nbas_N Mala_s_1-like Cytochrom_D1
Other DBs
NCBI-GeneID: 102923039
NCBI-ProteinID: XP_006991001
Ensembl: ENSPEMG00000019399
UniProt: A0A6I9LV60
LinkDB
Position
5:complement(58618311..58643505)
AA seq 589 aa
MKRVRTEQVQVAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANAVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQSGPKSTVESFY
SRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGGSSRSESSGLEPPDVPNPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHHVDTSRIRLACDTLEEEENEEDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
STCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtgcgcacggagcaggttcaggtggcagtgtcctgctacctcaaacgtcgg
cagtacgtggactcagaaggccccttgaagcaaggcctgagactatcacagacccctgag
gagatggcagccaacctcacagtccaatcagaatctggttgtgccaatgcggtgtctgca
gctccttgccaggcagaaccccagcaatatgaagtacagtttggacgactaagaagcttt
ctcactgattctgactcccagcacagccatgaagttatgcctctcctctaccccctcttt
gtctacctccacctcaacctggtccagagtggccccaagagcacagtggaaagcttctat
agccgcttccatggaatgttcctacagaatgcaagtcagaaggacatcattgagcagctg
caaaccacacagaccatccaggacattctgtcaaacttccaacttcgtgcattcctggac
aacaagtatgtggtccgtctccaggaagatagctacaactaccttatccgctacctccaa
agcgataacaacactgccctgtgcaaggtgcttgccgtgcacattcacctggacgttcag
cctgccaagaggacagactatcagctctatgccagtggtggctcctcccgaagtgagagc
agcggcttggagccaccagatgtgcccaatccaattctgcagaatgaggctgccctggaa
gtcttgcaggagagtatcaagcgggtcaaggatggacctccctccctcaccaccatctgc
ttctatgccttctataacacagagcagctgctgaatactgcagagatctcctctgatagc
aaacttctggctgctggatttgacaactcctgcataaagctctggagcttgcgctccaaa
aagctgaaatcagagccccaccatgtggacacatctcgtatccgtctagcttgtgacact
ctggaggaggaggagaatgaggaagataatgcaggcacagagatgaagatccttcgggga
cactgcggcccagtatacagcactcggttcctcgcagacagctcggggctgctctcttgt
tctgaagatatgtccatcaggtactgggacctggggagcttcaccaacactgtgctgtat
cagggacatgcctaccctgtgtgggacgtggacatcagcccctacagcctgtattttgcc
agtgggtcccatgaccgtaccgccaggctgtggtcttttgatcggacgtacccgctgagg
atatatgcaggacacctggctgatgtggactgtgtcaaattccaccccaactcaaactac
ttggctacaggttccactgataaaactgtccggctctggagtgcccaacaggggaactca
gtgcggctcttcacaggtcaccgaggtcccgtgctttcccttgccttttctcccaatggt
aagtacttggcatctgctggtgaggaccagcggttaaagctgtgggacttggcctctggg
acactttttaaagaactgagaggccacacagacagtatcaccagtctggcctttagccca
gacagcggtctggttgcctctgcctccatggacaactctgtgcgtgtctgggacatcaga
agcacgtgctgtaacacacctgctgatggctcttccggtgagcttgtgggcgtgtacact
gggcagatgagcaacgtcctgagtgtgcagttcatggcctgcaacctcctcctggtgact
ggaatcacacaagaaaatcaagaacattga

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