Peromyscus maniculatus bairdii (prairie deer mouse): 102923409
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Entry
102923409 CDS
T11302
Symbol
Ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102923409 (Ppfia2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102923409 (Ppfia2)
Membrane trafficking [BR:
pmav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102923409 (Ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
102923409
NCBI-ProteinID:
XP_042119529
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All DBs
Position
18:30948884..31414279
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AA seq
1286 aa
AA seq
DB search
MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLSLAQ
QRLQDVIYDRDSLQRQLNSALPQDIESLTGGLTGSKGADPPEFAALTKELNACREQLLEK
EEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSL
FEHHKALDEKVRERLRVSLERVSALEEELASANQEIVALREQNVHIQRKMASSEGSTESE
HLEGMEPGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKERLTTLSSRVGE
VEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHDM
NDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAAL
TKSDPTSSTSSDDYQYVMEAKLQEMISIRRKAEERHGNIEERMRHLEGQLEEKNQELQRA
RQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESETFRKNLEES
LHDKERLAEEIEKLRSELDQMKMRTGSLIEPTISRTHLDTSTELRYSVGSLVDSQSDYRT
TKVIRRPRRGRMGVRRDEPKVKSLGDHEWNRTQQIGVLGSHPFESDTEISDIDDDDRETI
FSSMDLLSPSGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVASVSLE
GLNLARVHPGTSITASVTASSLASSSPPSGHSTPKLTPRSPAREMDRMGVMTLPSDLRKH
RRKIAVVEEDGREDKATIKCETSPPPTPRAIRMTHTLPSSYHNDARSSLSASLEPESLGL
GSANSSQDSLHKAPKKKGIKSSIGRLFGKKEKARLGQLRGFMETEAAAQESLGLGKLGTQ
AEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIM
SALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMENLA
APAKTKESEEGSWAQCPVFLQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARML
DHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRRDASQHEIKDVLVWSND
RVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQARQILEREY
NNLLALGTERRLDENDDKNFRRGSTWRRQFPPREVHGISMMPGSSETLPAGFRLTTTSGQ
SRKMTTDVASSRLQRLDNSTVRTYSC
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgcccacgattaatgaggacaccccaatgagccaacgggggtcc
caaagcagtggctccgactcggactcccattttgagcaactgatggtcaatatgctggat
gaaagggatcgtctactagatacacttcgagagacccaagaaagcctctcactcgcccag
caaagactccaggacgtcatctatgacagagattccctccagagacagctgaattcagcc
ctacctcaggacatcgaatccctaacaggagggctgactggttctaagggggctgatcca
ccggaatttgctgcattgactaaagaactgaatgcttgccgggagcaacttctagagaag
gaagaagagatctcagagcttaaagccgaaagaaacaacacaagactgttactggagcac
ttggagtgccttgtgtcacgacatgaaaggtcactgagaatgaccgtggtgaagcggcaa
gctcagtctccctcaggagtgtccagtgaggtggaggttctcaaggcactgaaatctttg
tttgagcaccacaaggccttggatgaaaaggtaagggagcgactgagggtttctttagaa
agagtctctgcactggaagaggaactagcttcagctaatcaggagattgttgccttgcgt
gagcaaaatgttcatattcagagaaaaatggcatcaagtgagggatccacagagtcagaa
catcttgaaggaatggaacctggccagaaagttcatgaaaagcgtctatccaacggctcc
atagactcaacagatgacaccagccagatagtcgagctccaggaattgcttgaaaagcaa
aactatgaaatggcccaaatgaaagaacgcttaacaactctttcttcacgagtgggggag
gtggagcaggaagcagagacagcaagaaaggacctcataaaaacggaagaaatgaacaca
aaatatcaaagggacatccgggaggcaatggctcagaaggaagatatggaagaaagaatc
acaaccctggagaaacgttacctcagtgctcagagagaatctacctccattcatgacatg
aatgataagctagaaaatgagttggcaaacaaggaagccatcttgcggcagatggaagaa
aagaacagacagttacaagagcgtcttgaactggctgagcaaaagttacagcagaccatg
agaaaggcggaaactctgcctgaagtagaggctgaactggcccagagaattgcagcccta
acaaagtctgatccaacctcttctacctcatctgatgattatcaatatgttatggaagct
aaactccaagaaatgatctccatacgtaggaaggctgaagagaggcatggaaatattgaa
gaacgtatgagacacctagagggtcaactggaagagaagaatcaggaacttcaaagagcc
aggcaaagagagaaaatgaatgaggaacataataaaagattatctgataccgtggacagg
cttctgacggaatccaacgagcgtctacagctgcacttgaaagaaagaatggctgctctg
gaggagaagaatgttttgattcaagaatcagaaaccttcagaaaaaatcttgaagaatct
ttacatgataaggaaagattagcagaagaaattgagaagttaagatctgaacttgaccaa
atgaaaatgagaactggctctctaattgaacccactatatcgagaacgcacctagacaca
tcgactgagttgcgatattcagttggttctctcgtggacagccagtctgattacagaacc
actaaagtaatccggaggccaaggagaggccgtatgggtgtgcgaagagatgagccaaag
gtgaaatctctgggggatcatgaatggaacagaactcagcaaattggagtcctaggcagc
cacccatttgagagtgacactgaaatatccgatattgatgatgatgacagagaaaccatt
tttagctcaatggatcttctctctccaagtggccattccgatgcccagactctagctatg
atgcttcaagaacaattggatgccatcaacaaagaaataaggctaattcaagaagagaag
gaatctacagaactgcgtgccgaagaaatcgagaatagagtggctagcgtaagcttggaa
ggcctgaatttggcaagggtccatcctggtacctccatcactgcctctgttacagcttca
tcgttggccagctcttctccccctagtggacactcaacgccaaagctcacgccaagaagc
cctgctagggaaatggaccgcatgggagtcatgactctgccaagtgatctaaggaaacat
cggagaaagattgctgtggtggaagaggatggacgggaggataaggcaacaatcaaatgt
gaaacttctcctccaccaacacccagagccatcagaatgactcacacgctcccttcttcc
taccacaatgacgccaggagcagtttatcagcctcccttgagccagaaagccttggcctt
ggcagtgccaatagcagccaggactctcttcacaaagcccccaagaagaaaggaatcaag
tcttcaatcgggcgcttgtttggaaaaaaagaaaaggctcgacttgggcagcttcgaggc
ttcatggagaccgaagctgccgcccaggaatccctaggcttaggcaagcttggaactcaa
gcagaaaaggacagaaggttgaagaaaaagcatgaactccttgaagaagctcgtagaaaa
ggattaccttttgcccagtgggatggacccactgtggtcgcttggctggagctctggttg
ggaatgcctgcttggtacgtggcagcctgcagagccaatgtgaaaagtggagccatcatg
tcggctctctcggacacggaaatccagagggagattggaatcagcaaccctctgcatcgt
ttaaagctcagactagctatccaggagatggtgtccctcacgagtccctcagctcctcct
acatctcgcacgccttcaggcaatgtctgggtgacccatgaagaaatggaaaaccttgca
gctccagcaaaaacgaaagaatctgaggaaggaagctgggcccagtgtccggtctttcta
cagaccctggcttacggagatatgaaccacgaatggattggaaacgaatggctgcccagc
ctggggttgcctcagtacagaagttactttatggaatgcttggttgatgcacgaatgcta
gaccacctcaccaaaaaagatcttcgtgtccatttaaaaatggtggatagtttccatcga
acaagtttacaatatggaattatgtgcttgaaaagattgaattatgatagaaaagagcta
gagagaagacgagacgcaagtcaacatgaaataaaagatgtcttagtgtggagcaatgat
cgagttattcgctggatacaagcgatcggacttcgagaatatgcaaataacatcctcgag
agcggagtgcatggctcacttatagccctggatgagaactttgactacagcagcctggct
ttattgttgcagattccgacacagaacacgcaggcaaggcagattcttgaacgcgagtac
aataacctcctggctctgggaactgagcggcgactggatgaaaatgatgacaagaatttc
agacgtggctcgacctggcgaaggcagttccctcctcgtgaagtacatggaatcagcatg
atgcctggctcctcagagacattgcccgccggattcaggttaaccacaacatctgggcag
tcaagaaaaatgacgacggatgttgcttcatcaagactgcagaggctagacaactccact
gttcgcacatactcatgttga
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