Peromyscus maniculatus bairdii (prairie deer mouse): 102923476
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Entry
102923476 CDS
T11302
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102923476
09122 Translation
03013 Nucleocytoplasmic transport
102923476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102923476
03041 Spliceosome [BR:
pmav03041
]
102923476
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102923476
Spliceosome [BR:
pmav03041
]
Complex C
Other components
EJC/TREX
102923476
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102923476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
102923476
NCBI-ProteinID:
NP_001366040
Ensembl:
ENSPEMG00000011125
UniProt:
A0A6J0D4G6
LinkDB
All DBs
Position
10:97190396..97226431
Genome browser
AA seq
1588 aa
AA seq
DB search
MAMASATVVVPAEWIKNWEKSGRGEFLRLCRILSESKSRDTLACRDFQQALYELSYHVIK
GTLKPEQASNVLSDISEFREDIPLILADIFCILDIETNCLEEKSKRDHFTQLVLACLYLV
SDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIVE
LGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMNM
CEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDDLYVHLLPADSCIMNE
YKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKAPDNQKLGLLEALLTIGDWQ
HAQSIMDRMPPYYAASHKVIALAICNLIHVTIEPLYRRVGVPKGAKGSPVNALQSKKSPK
QAESFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEVIF
SCLLSVTDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYHSHPLLVK
VKAHTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQIQKYDNLITPVVDS
LKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWEDISPQFYTTFWSLTMYDLAVPHTSYE
REVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDRV
FSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKKPDLYALAMVYSGQLKSRKTYMIPENEFHHKDPPPRNAATSV
QNGPSSGLPSSIGSTSKSDESSTEEADKSRERSQCGVKAVNKASSAIPKGNSNNGISGSN
TKAVKENDKEKGKEKEKEKKEKTPAVIPEARVLGKDNKEKPKEEQPSKDEKIRDTKERMP
KSDKDKEKLKKEEKAKDEKFRIIVPNVESKSTQEREKEKEPSRERDLAKEMKSKETVKGG
EKTPVSVSLKSPVSRTDNAEPEREKRRKVDSHPSPSHSSTIKDSLVKLKESSAKLYINHT
LPPLCKSKERETEKKDLEKSRERSREREKKDEKDRKERKRDYSNNDREVPLDLIKRRKDE
NGILAVSKHKSENPCESPYPSEKDKEKNKSKSSGKEKGDSFKPEKMDKISSGKKESGHDK
EKVEKKEKWDSSGDKEEKKHHKSSDKHR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcctctgcaactgtggtggttcccgcggagtggatcaagaactgggagaaa
tctgggagaggcgagtttttgcgtttatgccggattctcagtgaaagtaaaagccgcgac
actttggcttgtagagattttcaacaagctctctatgaattgtcataccatgtcattaaa
ggaactttaaagcctgaacaggcatcaaatgttcttagtgacatcagtgaatttcgtgaa
gatatcccacttattcttgctgatatattctgcatattagacattgagacgaattgttta
gaagaaaaaagcaagagagatcactttacacaattggtattagcctgtttatatttagtt
tcagacacagttttaaaggaacgcttggatccagaaacattggaatcattaggccttatt
aagcaatcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataaa
cagcagaagttcaatttgttaagagaagaaaatgaaggttatgccaagcttattgttgaa
ttggggcaagatttatctggaaatattactagtgatttaatcttagaaattctcaaatct
ttaataggatgttttaatctggatcccaatcgagttttggatatcattttagaagtgttt
gagtgtaggccagaacaccatgacttctttatatctttattagaagcctacatgaatatg
tgtgaaccacaaacactgtgtcatattcttggattcaaattcaagttttaccaggagcca
aatggtgagactccatcatctttgtatacagttgcagcagtacttctgcagtttaatctt
attgatttggatgatctttatgtacaccttcttccagctgatagttgcattatgaatgaa
tacaaacgagaaattgtggaagccaagcacattgttagaaaacttactatggttgtattg
ccttctgacaaaagtgatgaacgagagaaagaaaagaaaaaggatgataaagtagagaag
gcacctgacaatcaaaagcttggcttgttggaagccttgttaactattggtgattggcag
catgcacagagtattatggatcggatgcctccgtactatgcagcatcacataaagtaata
gcccttgctatttgcaatcttatacatgtaactattgagcctctttaccgaagagttggt
gttcctaaaggtgctaaaggctcacctgtcaatgctttacaaagcaagaagtcaccaaaa
caggcagagagctttgaggacttaaggagagacgtattcagtatgttctgttatcttggt
cctcacctttcccatgatcccatcttatttgcaaaggttgtgcgcataggcaagtcattt
atgaaggaatttcagtctgatgggaaacaagaaaataaagagaaaatggaagttatcttt
agttgtttgcttagtgttactgatcaggtactgcttccgtctctttctttgatggattgc
aatgcgtgtatgtcagaggaactatggggaatgtttaaaacatttccttatcagcataga
taccgcttatatggccagtggaagaatgagacttaccacagtcacccacttttagtaaaa
gttaaagcccatacagtagacagagccaagtacatcatgaagcgtctaaccaaggaaaat
gtgaagccttcaggaagacagattgggaaactgagccacagcaatccaaccattttgttt
gattatgtcttgtcacaaatacagaagtatgataacttaataacacctgtggtagactca
ttgaaatatctcactgcgttgaattatgatgttttggcctactgtatcatcgaggcatta
gctaatccagaaaaagaaagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcggtttttcgtaaatacccaattgatcttgctggtctt
cttcagtatgtagccaatcagttaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggttcaaaagatggcaggcatagaagttacagaagaaatgacaatggagcagcta
gaggctatgactggtggggagcagctgaaagcggagggtggatattttggccagataaga
aacactaaaaaatcctctcagagattgaaggatgcactactggaccatgatcttgccctt
cctctttgtttgcttatggctcagcagaggaatggggtgatctttcaggaaggcggagag
aaacatttgaaacttgtcggaaagctgtatgaccagtgtcatgatactttggtacagttt
ggtggatttttagcatcaaatttaagcacagatgactacataaagagagtaccttcaatt
gatgtgctttgtaatgaatttcatacaccccatgatgcagcattttttctgtctcggcca
atgtatgcacaccatatttcatcaaagtatgatgaacttaagaaatcagaaaagggaagt
aaacagcaacataaagtccataagtacattacatcgtgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacacgtttccaaagtctgggaagacatcagccctcagttc
tataccacattctggtctctcacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaactcaagatccagatgaaagcaattgacgacaatcaagaaatgcct
ctgaataaaaagaaaaaagagaaagagcgctgtactgccctccaggacaagcttcttgaa
gaagaaaagaaacagatggagcatgtacagcgagtgctacagagactgaaattggaaaag
gacaactggctcttagcaaaatccactaaaaatgagaccatcacaaagtttctccagttg
tgtatatttcctcgatgtattttttcagcaattgattctgtttactgtgctcattttgtt
gagttggtccatcaacaaaagactccaaatttctccacacttctctgctatgaccgagtt
ttctctgacataatttacatggttgctagctttactgaaaatgaagctagtcgatacggg
agatttctttgctgtatgttagagactgtgactcggtggcatagcgacagatccacctat
gagaaggaatgtggaaactatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcagttagattatgagaattttcgacatgttgtacataaatgg
cattataaactaaccaaggcatcggtacattgccttgagacaggtgaatatactcatatc
aggaatatcttgattgtgctaacaaaaatactgccatggtaccccaaagttttaaatctg
ggtcaggctttggaaagaagagtgcataagatctgccaagaagagaaagaaaagaagcca
gacctatatgcactagcaatggtctactctgggcagctgaaaagcagaaagacatacatg
atacctgaaaatgaatttcatcacaaagatcctcctccaagaaatgctgctacaagtgta
caaaatgggcctagtagtgggctgccatcatctataggaagtacatctaagtcagatgag
agcagtactgaagaggctgacaagtcacgggaaaggtctcagtgtggtgtgaaagctgtt
aataaagcttctagcgccataccaaaagggaattcaaacaatggaattagtggctctaac
accaaagctgttaaggaaaatgacaaagaaaaggggaaagagaaagaaaaagaaaaaaaa
gagaagaccccagctgttattccagaggctagggtacttggtaaagacaataaagaaaaa
cccaaggaagaacagccaagtaaagatgagaaaataagagataccaaagaaagaatgcct
aagtctgacaaagacaaggaaaaattaaagaaggaggaaaaagctaaagatgagaagttc
aggatcatcgtccccaatgtagaatcaaaatccactcaagaaagagaaaaagagaaagag
ccatcaagagaaagagatttagcaaaggaaatgaagtcaaaagaaactgttaaaggaggg
gaaaaaacaccagtttctgtgtccttgaaatccccagtttcccgaacagataatgcagag
cccgaaagagaaaaacgtcgaaaggttgattcccacccttctccatcccattcttccaca
ataaaggacagtctggtcaaactcaaggagtcttcagcaaagctctacatcaaccacact
ctaccgccattgtgcaagagtaaggagagagaaacggagaagaaagatttggagaagtca
agggagagatccagagaaagagagaagaaagacgaaaaggacaggaaagagcggaaaagg
gattattcaaacaatgaccgggaagtgcccctagacttaatcaaaagacggaaggatgaa
aatggaatattggcagtttcaaaacacaaaagtgaaaatccctgtgagtctccttatcca
agtgagaaagacaaggaaaaaaataagtcaaagtcttcaggcaaagaaaaaggtgattca
tttaaacccgaaaagatggataaaatatccagtgggaaaaaggagtctggacatgataaa
gaaaaggtagaaaagaaagagaaatgggacagttctggagataaggaagagaagaagcat
cataagtcctcagacaagcacagataa
DBGET
integrated database retrieval system
