Peromyscus maniculatus bairdii (prairie deer mouse): 102924188
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Entry
102924188 CDS
T11302
Symbol
Pkd1l1
Name
(RefSeq) polycystin-1-like protein 1
KO
K04987
polycystin 1L1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
GPS
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102924188
NCBI-ProteinID:
XP_076403065
LinkDB
All DBs
Position
10:complement(12157882..12285712)
Genome browser
AA seq
2663 aa
AA seq
DB search
MAELSAFRLSVGGSWCTECGIQDQLAQRVAEAKAEDIFEDLKRDQFLIIIIVIIIIVIVI
VVVVVVVVVVIVVVITLCVFVFDAPSAGALCSPKKEVLDCEGLLCSAEDLPNVLLLSSSD
PPPGIACTCSLLKSWYHPKSPSSLIQHPPGSIPVTQPENAGHFATCYFLETGAQVPPALG
IRVHLASGAALCLLVDFGDSCGAEMRLCTMTDVAAVTGYHRYRKEGVYKLRAVVHDVHGV
DVELGPYYVDIGRENVSVFMNSSSIHDGEALSFADPLPQQKGTIVMHGYSSVSSYNVSFI
SQARVGSGQAWNGVTVGYKLQSVSIHTNGTVFAADTNITFVAVTNETVPLEFAWYFGDDP
PVRTTSRSIRRRLSIPQWYHVMVKATSRVGSVVSESHLIRVQKRITANRLMSTASALVNA
NVSFECRLNFGTDVAYLWNFGDGTIELGSSSSSHVYSREGEFTVEVLAFNNISSAVLRKP
LFIVHEPCQPPPVKNMGPKKVQIWRSQPLRLAVTFEAAVLCNISQGLSYSWSVVDAEATA
VTLHAAVHTHRQTIRLPSYTLECGNYTAVAKVQIKGSIVYSNYCVGVEVRARAPVSVISE
GTHIFIPRSTTTSIILRGVQSYDPDSPGAALRYHWTCTAASLPTSCFEDSTPYQVDTQAP
AISFPAKWLSECCDQFLVTLTVSSNGRNSSQAVIFLSTHPDPDFRFVHISWVNFRDIRVN
WNEELSLRAVCEDCGDVADLTYSWDLFLVNATEKNTVEVPFCSTVGLLGASAFGDIKKLS
KSDLQSSPRGSQTLHSLERSPMPLSWSALHNLGSISTESMAGGHHISAGGSMAGSGEPME
DDSSLSPAPGSLEEEAFMMSTPEGSWSPSSSSPASDGKCHHLYTLSLVSRHQTHLGSSEW
NGTVTPTFVLSLRNHLDAQCIIEHRMINVSCNSANFQESGPSTSTEESANGGDNLLGPFL
HTGRAKPALMVDWPKTLVNRAVFHNYTSSGIMGPAVTITPFSLSSGEMYVLQASVASKHA
LLGKAQLYVTVNQVPRDMSCQVRPHSGIEAHTIFSVFCMSGKPDFHYEFRYRIGNTSPHT
LYRGRDTQYYFLLPAGEASDDYKVFVSTEITDGQGSKVQPCTVEVTVLPRYHGNDCPDKD
LYSSTLENLSSLQLLGSYTEVRNYVTVIAAILSRLYVRSTNTSSCGLWSQIQDVLISSAC
EVPVTDQEVMVDSLHILRDLISFPNKLSLMSGMHILKYAQMSLAQGQSSEKWLVNKKLGV
ELILLISGVWEASKEDTRNEEYLQEEGMKIISDTLLASLSLSHQHQLHISTGQMEFWTLL
HHSFQSSIQNLGFISVHFPGGLARHSPAQEESQSPCYISQLMFFKSSPYPRGRAPGQVGG
VVSPGLYSCHSRRPILRGRLAMPLTVEFGEEDHLHKRNPNMFALLRDEVNLHRFTGLSEN
PQETLQIRIEFSKPVTRAFPVMLLVRFSKKATPSDFLMKQVYSWDKQTVHIYVPAVPWKG
ANVGYLSLLDADYDRRPPNKYLAGTVNYTVHFQWTQCVFWDKTEWRSEGSYPQPGMSPEK
VSCSYHHLAPFSVLRRKVNATFEVSPISEFRSHPHNLLPAIFSVFFLVLYGLLVAKSRCV
DCHKKKKPGCIFLKEDTPPGHQLYAVIIDTGFRSPAQFTSKVFIVLCGENGLSETKELCC
PEMSLFGRNSRHTFILSTPNRLGPLQKIRLWHDSSGPSPNWFLSHVMVKELRSGQGWFFS
AQCWLAVGLCDGCVQRELFCLRHGLGFWKLFYSKFTEYLEDFHIWLSLYSHPPSSNYLHT
QRLAVSFCLLCVYSCLAALVTVGGHEQRPLDVGPTLITLESFGLSLLCTFLACPAAQLLS
LLFRVSQEAAGHLQAAPQWPLRGVKTEVPQGPDPIGRPGLRQPSQHPASDILPGTDRAWR
MAASSSGVCASFPAPREKSHHPPPRSQAPSSGFEGLVLQGSRACLLWSSSVAWAICGSAS
LACGLGTGFLGYRFVPEQFMWWLHLLLLSVICCASVTQPLMICLAALAFAWKRKHDSQFF
TESLHDATRGLDLELEEYSRTHIPHSPSSCCSDSAEEAERVLAARQRERHLRWAQPPSRA
KFRVTRERLRKESRVQAALRDISVHSLMLLLLLFITYGRVSPGEYSLNQAIREEFTRNAR
HSFGDLSSTDDWWDWTLSTLLDGLHPEGPSVGARGAQPGALGGQCHLIGPSVIKQLKVSF
DTACTPPRPFSELMEDALPTQSHDLDLESQNMTPGGPEACGVKKESSMHSLGRTRHEAHS
ALTALRANRWINQGSRAMSVHFTLYNPPTRLFTSVTLGAELLPTGGLAPSSLVESFSIFH
NASVPQYLLKLSELVFLVLNVTHLCFQLWGMATKGVLSYWRKLRHWLELSMVGVALAYYA
ASGYLTTLAENVTDQFHKGFHQMYVDLSLMVSWNQRARWLRGILLFLWMLKCVHLLGFLS
TLASFSAVTHSSLSRAFAPALLGALLLAAHSHLRQFLLSTGTPSPGTSADVFPGLLLQFL
GRSPKDALHNRLESDHQAMTCYCGALFLLVATLCFGMLRASLLTFFRKRKSFHRKSLVTL
NNVAVYAWHKVLTLLGLETTTPEEAEVAADHNYYLDEFSSLLDELLVKIDCLSDSLELSI
LEKHWKRAGESMAVDSPSVGISL
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgtctgctttccgattgagtgtgggaggaagctggtgtactgagtgtggt
atccaggatcagctagcacagcgcgtggctgaggcaaaagctgaggacatttttgaggac
ctgaaaagagaccagttccttatcatcatcatcgtcatcatcatcatcgtcatcgtcatc
gtcgtagtagtagtagtcgttgtcgtcgtcatcgtcgtcgtcattactctgtgtgtgttt
gtgtttgacgccccttcagcaggagccctctgcagccccaagaaggaggttcttgactgt
gaaggactgctgtgctctgcggaagacttgcccaacgtgctgcttctgagttcctcagat
ccccctcctggcatcgcctgtacctgcagcctcctcaaatcctggtaccatcccaagagt
ccctcttccctcattcagcatcctcctgggtccatcccggtgacacagcctgaaaatgct
ggccactttgccacctgctacttcctagaaacaggtgctcaggtgcctccagctctgggc
atccgtgttcacctggcttccggagctgctctctgtctgctggtggactttggggacagt
tgtggagctgagatgagactgtgtacaatgacagatgtggctgcagtgactggctaccac
cggtacaggaaagaaggagtctacaagctcagggctgtagtccatgacgttcatggagtt
gatgtggaactgggaccttattatgtggacattggccgtgagaatgtgtctgtgttcatg
aattccagctctatccacgatggtgaagctctttcctttgctgaccccctcccacagcag
aaaggcaccatcgtgatgcatggctattcgtctgtttcttcatacaatgtgtcctttatt
tctcaggctcgagtgggcagtggccaggcttggaatggtgtgactgttgggtataagctg
caatctgtgtctatccacaccaatggaaccgtgtttgctgcagacacgaacatcacattt
gtggctgttaccaatgaaactgtacccctggagtttgcatggtattttggagatgaccca
ccagtgaggacaacttccagaagcattagaagaaggctgagcatccctcagtggtaccat
gtgatggtcaaggccaccagtagggtcggcagtgtggtctctgagtcccacctcatcagg
gtacagaagagaatcacggccaatcggctcatgtccactgcctcagccctggtaaatgcc
aatgtgtcctttgagtgcaggctcaactttggcactgacgtggcctacttgtggaacttt
ggagatgggaccattgagcttggcagcagctcctccagccatgtctacagcagggaggga
gagtttacagttgaagtccttgccttcaataacatcagctccgccgtcctaagaaagcca
cttttcatcgtgcacgagccttgccaaccacctccggtgaagaacatggggcctaagaag
gtgcagatttggaggtctcagcccctgagacttgctgtgacatttgaagctgcagttctc
tgtaacatttcccaagggctttcctactcctggagtgttgtggatgctgaggcgactgct
gtcaccctccatgctgctgtccacacccacagacagaccatcaggctcccaagctacacg
ctggagtgtgggaactacaccgctgtggccaaggttcagatcaagggaagcatagtatat
agcaactactgtgttggtgtggaggttcgagcccgggctcctgtcagcgtgatctctgaa
ggcacacacatcttcatccccaggtccaccacaacctccatcatcctcagaggggtccag
tcctatgaccctgacagcccaggagctgctcttaggtatcactggacctgcactgcagcc
agcttgccaacgtcctgctttgaggactctactccataccaagtggacactcaggctcct
gccatttccttcccagcaaaatggctcagtgaatgctgtgaccagtttcttgtgacattg
acagtctccagcaatggacggaactcttcgcaggctgtgatattcctgtccacccatcct
gacccagacttcagattcgtccacatctcatgggtcaattttagagacatccgtgtaaac
tggaatgaagaactgtctctcagagctgtgtgtgaagactgtggagatgtagccgacctc
acttattcctgggatctcttcctagtcaatgcaacagaaaagaatacagtggaagttccc
ttctgtagcaccgtggggctgctgggcgcttcagcatttggggacattaagaagttgtct
aagtcagacctgcagtcaagccccagaggatcacagacactacactcactagagcggtca
cctatgcccctgagctggtcagctcttcacaacctgggaagcatttccactgagtccatg
gcaggtggccaccacatttctgctgggggttccatggcaggctcaggggagcctatggag
gatgacagctcactgagtccagcaccaggttccctggaggaggaagcttttatgatgagc
accccagagggaagctggtccccttccagctcctctcctgcctctgatggtaagtgccac
catctctacacattgtcccttgtatctagacaccagactcacctgggaagcagtgaatgg
aatgggacagtcacccccacctttgtcctgagtctaagaaatcatcttgatgcccagtgc
atcattgaacacaggatgatcaacgtgtcatgcaacagtgccaacttccaggaatcagga
ccaagcaccagcaccgaggagagtgccaatggtggggacaacctactgggtcctttcctt
cacacaggcagagcaaagccagctctcatggttgactggcccaagaccctggtcaaccga
gctgtcttccacaactacacctcctcaggtatcatgggaccagctgtgacaataacaccg
ttctcactgagcagtggcgagatgtatgtcttacaggcttctgtagcttcaaagcatgcc
ttactaggcaaagctcaactctacgtaacggtcaaccaagtcccacgggacatgtcctgt
caggtgcgaccccacagtggtatagaggcacataccatcttcagtgtcttctgcatgtca
gggaaaccggactttcattacgaatttcgttaccggataggaaacacttctccacacacc
ctgtaccgtggacgagatacccagtactactttttattgccagctggtgaggcctcagac
gattacaaagtctttgtttctactgagatcacagatggccaaggctccaaggtgcaacca
tgcactgtggaagtgactgtgctaccccgttaccatggaaatgactgccctgacaaggac
ctatacagctccaccctggaaaacctgtcttctctccagctgctggggagttacacagaa
gtaaggaactacgtcaccgtgatcgccgccatcctgagccgtttgtatgtgaggagcaca
aacacttcttcgtgtggtctatggtcacagatacaggatgtattgatttcttctgcatgc
gaagtacctgttacagaccaggaagtgatggtggattctcttcatatattgagagacctc
ataagcttccctaataagttgagcttgatgagtggcatgcacatcctcaaatatgcccag
atgtcccttgctcaaggtcagtcctctgagaagtggctggtcaacaaaaaactaggagtt
gaacttatccttctcatctctggagtctgggaagcttccaaagaagacacaaggaatgaa
gagtacctgcaagaagaaggcatgaagatcatctctgacacgttactagcctctctctcc
ctgagccaccagcatcagctgcacataagcactgggcagatggagttctggacccttctc
catcacagctttcagagttctatccagaacctgggcttcatctcggtccatttccctggt
ggcctggccaggcacagtcctgctcaagaggaatcacaaagcccatgctacatcagccag
ctcatgttcttcaaaagcagcccttatccaaggggacgagctcctggacaggtgggtggt
gtggtgagccctgggctctacagctgccacagcagaagacctattctcagaggacgactc
gcgatgcccctgactgtggagtttggggaggaagatcacctgcacaagagaaatccaaac
atgtttgcgttgcttcgagatgaggtgaatctccaccggttcactgggctctctgaaaac
ccccaggaaaccttacagatccgcatcgaattctccaagcctgttacaagagccttcccc
gtcatgctgttagtaaggttctccaagaaagccacgccttctgattttcttatgaagcag
gtctactcctgggataagcagactgttcacatttatgtacctgctgttccatggaaagga
gccaatgtagggtatttatccctattagatgctgattatgacaggaggcctccaaacaag
taccttgctgggacagtaaactatacagtgcatttccagtggacgcaatgtgtgttttgg
gacaagacagagtggagatccgaaggttcctatccacagccaggaatgtctcctgaaaaa
gtcagctgcagctaccatcaccttgcacctttctctgtcctaagaaggaaggtgaatgcc
actttcgaagtgagccccatttctgagtttcggagtcacccacacaacttgcttcccgct
attttcagtgtgtttttcttggttctttatggattgttggtggctaaaagcagatgtgta
gattgtcacaagaaaaagaaacctggttgtatttttctgaaagaagataccccacctggc
caccaactgtatgcagtcatcattgacactggcttccggtcaccagcccaatttacgtca
aaggttttcattgttttatgtggtgaaaacggactctcagaaaccaaagaactctgctgt
ccagagatgtccttgtttggaaggaattccaggcacacctttatactgagcactcctaac
cgactggggccactccagaagatccgactctggcatgacagcagtggaccttccccaaac
tggttcctcagccacgtgatggtgaaggagctacggtcaggccaaggctggttcttctct
gcccagtgctggctggctgtgggcttatgtgatggctgtgtgcagcgggagctcttctgc
ctgcgccacggtcttggcttctggaagcttttctactcaaagttcacggagtacctggag
gatttccacatctggctctccctgtacagccatcccccctccagcaactacctacacaca
cagcgacttgcagtgtccttctgcctcctgtgtgtctactcctgcctcgctgccctggtc
actgtgggaggccatgaacagcgccccctggatgtgggtcctactcttatcactctggaa
tccttcggtctgagtctcctgtgcaccttcctggcctgcccagctgcacagctcttatca
ctgctcttcagggtcagccaggaggctgcagggcatttacaggctgcgccacagtggcct
ctaagaggagtgaagacagaggtacctcagggccctgatcccatcgggagaccaggtctg
aggcagccatcccagcatcctgcatcagacattctcccagggactgaccgagcttggagg
atggcagccagtagcagcggtgtgtgtgcatcctttcctgccccgagagagaagagccac
caccctcctcccaggtcacaagctcccagcagtggttttgaaggacttgtgctccagggg
tcaagggcctgtctgctctggtcaagctctgtggcctgggccatttgtggatcagcttcc
cttgcctgtggtttggggacagggttcctgggctacaggtttgtgccagagcagtttatg
tggtggctgcacctgctgttactctctgtgatctgctgtgcatctgtcacccagccactc
atgatctgtttggcagcgctggcctttgcctggaaaaggaaacatgacagccaatttttt
actgaatctttacatgatgcaaccaggggtctcgatttggaattggaagaatactccaga
acccacattcctcattctcccagctcctgttgttctgacagtgctgaggaggctgaaagg
gtcttggctgcccgacaacgagaacgccacctgcgctgggctcagccaccatccagggcc
aagttcagagtgaccagggagagactgaggaaagagagccgggtgcaggcagccctgaga
gacatctccgtgcacagcctcatgctgctgctgcttttgtttataacatacgggagagtc
tctccaggtgaatattctctcaatcaagccatcagggaggaatttacaagaaatgccaga
cactcctttggggacctgagcagcaccgatgactggtgggactggactctgagcactttg
ctggatgggctgcacccagaaggaccctctgttggagcccggggggctcagcctggagct
ctcggagggcagtgccatctcataggcccttctgtgatcaagcagctgaaggtttctttc
gatactgcatgcacacctcccaggccattctcagagctcatggaagatgcactacctaca
cagagtcatgaccttgaccttgagagccaaaatatgacgcctggtggtcctgaggcctgt
ggggtgaagaaggagagctccatgcacagcctaggaagaacaaggcatgaagcccactca
gccctgaccgccctcagggccaacaggtggatcaaccagggcagcagggccatgtctgtg
cacttcactctctacaaccctccaacacgactcttcacgagtgtgaccctaggcgcggag
ctgctccccacgggaggtcttgccccctcatccttggtagagtcgttcagcatcttccat
aatgcctcagtcccgcagtaccttcttaagctttctgagctggtgttcctggtactcaac
gtgacccacctctgtttccagctctggggaatggccaccaagggggtcctcagctactgg
agaaaactgagacactggctggagctctctatggttggggtagccctggcctactatgca
gcctctggttacctcaccacccttgctgagaatgtcactgaccagttccacaaaggattt
catcagatgtatgtggacctaagtctgatggtgtcatggaatcagcgggcaagatggctc
cggggaatcctcctattcctctggatgttgaaatgtgttcacctcctcggcttcctgagc
accctggcatccttctcagcagtgacacattcgtctctctccagagcctttgcaccagca
ctgttgggggccctgctgctggcggcccattcccacttgcgccagtttctgctctccacc
gggacgccatcacctggcacctctgcagatgtatttcctgggctgctgcttcagtttctg
ggaagaagcccaaaggacgcactgcacaatcgtttggagtctgaccatcaagccatgact
tgttactgtggggccctctttctgctggtggcaacgctgtgtttcggaatgctgagggct
tccctcctgacttttttccgaaaaagaaagtcttttcacagaaaatctctcgtgacgctt
aacaatgttgctgtttatgcctggcacaaagtcctcacccttctggggctggaaacaaca
actccggaagaggcggaggtggctgcggaccataattattacctggatgaattttccagc
ctcttggatgaacttctggtgaagattgactgtttgtctgacagcctagaactttctatc
ctagagaaacactggaagagggcaggggagtcaatggcagtggatagtccttcagttggc
atttcattgtaa
DBGET
integrated database retrieval system
