Peromyscus maniculatus bairdii (prairie deer mouse): 102924408
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Entry
102924408 CDS
T11302
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102924408 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102924408 (Trim54)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102924408 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
DUF349
PHP
CoiA_N
SpoIISA_toxin
COG2_C
DUF1421
DUF5799
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
FlgN
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102924408
NCBI-ProteinID:
XP_006995589
Ensembl:
ENSPEMG00000001031
UniProt:
A0A6I9M3H7
LinkDB
All DBs
Position
22:17412214..17438385
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHNMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGAAGDEEDDEVALDGDESNAGLEEERLDGP
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggtttcaagccgctgctaggggatgcgcacaacatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctctaacccc
ctgtggcaatcccggggctccacaactgtgtcgtcgggaggtcggttccgctgcccgtcc
tgcaggcatgaggttgtcctggaccggcacggagtctacggcctgcagaggaacctgctg
gtggagaacattattgacatctacaagcaggagtcctcccggccactgcactcgaaggcc
gaacagcacctcatgtgtgaggaacacgaggatgagaagatcaacatctactgcctgagc
tgcgaggtgcccacctgctctctctgcaaggtcttcggtgcccacaaggactgtgaggtg
gcccctctgcccaccatttacaaacgccagaagagcgagctgagcgatggcatcgccatg
ctggtggcaggcaatgaccgtgtgcaagctgtgatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcaactgttaaaccagaggttcgagaccctg
tgcgccgtgctggaggagcgcaagggcgagctgctgcaagcgctggcccgggagcaggag
gagaagctgcagcgtgtgcggggcctcatccgtcagtacggagaccacttggaggtttcc
tctaagctggtggagtccgccatccagtccatggaggagccgcagatggctctctacctc
cagcaggccaaggagctgatcaacaaagtcggggcgatgtcgaaggtggagctagccgga
cggccggagccaggctatgagagcatggagcaattctccgtgagcgtggagcacgtggcc
gagatgctgcggaccatcgacttccagccgggcgccgccggggatgaagaggatgacgag
gtggctttggacggggatgagagcaacgcagggctggaggaggagcggctggacgggcca
gaaggcctgcactga
DBGET
integrated database retrieval system
