Peromyscus maniculatus bairdii (prairie deer mouse): 102924664
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Entry
102924664 CDS
T11302
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102924664 (Shank1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102924664
NCBI-ProteinID:
XP_076432295
Ensembl:
ENSPEMG00000009151
LinkDB
All DBs
Position
1:complement(37728801..37789878)
Genome browser
AA seq
2167 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPQGTRGPGSGTPGNLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGAPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGTPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGRQESRSDKAKRLFRHYTVGSYDSFDAPSLINGIDSGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKASQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKFEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASEGPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYDRPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPGSGGPLSASSPSSFDGPSPPDTRGGGREKSLYHGGALPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGG
SSGPTQATALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGSLPPASSPT
SPALPRPEPPPPGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPDSAGGGGS
SPSPAPATSPVPPSPSPVPTPGSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTL
FLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESGGSSGGYGAYAAG
SRAYGGSGSSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSDGGGTPQP
PPRPPSPRYDAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPARRELGYRAGLGSQEKALP
ASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPTPLPGVSKAWRTAAPEEPERLPLHVRF
LENCQARPPAAGARGSSTEDGPGVPPPSPRRVLPASPTSPRVSEENGLPLLVLPPPAPSV
DVDDGEFLFAEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPSPATPLPAAPPPAVAAAP
PTLDSTASSLTSYDSEVATLTQGAPTAPGDTPAPGPPAPAAPAPPAPQPGPDPPPGTDSG
IEEVDSRSSSDHPLETISSASTLSSLSAEGGGNTGGVAGGGAGVASGTELLDTYVAYLDG
QAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGNLRPGPSGGLRDPVTPTSPTVSVTGAGT
DGLLALSACSGPSTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGP
LSQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSTDSHHGGASYIPE
RTSSLQRQRLSEDSQTSLLSKPSSSIFQNWPKPPLPPLPTGSGVSSSTAAAPGAISPSAS
SASASSRHLQGVEFEMRPPLLRRAPSPSLLPASDHKVSPAPRPSSLPILPSGPLYPGLFD
IRSSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKP
LGFWTKFDVADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRA
LKFFLER
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagaatccgacagctccccagacgggccagggagaggcccccaggggact
cggggcccgggcagcggaacacctggtaacctggcctctacccgaggcctccagggacgc
tccatgtctgtccccgacgacgcccacttcagcatgatggttttcaggattggcatccct
gacttgcaccagacgaaatgcctgcgcttcaaccctgatgccaccatctggacagccaaa
cagcaggtactctgtgccctgagtgagagcctacaggatgtgcttaactacggactgttc
cagccggccacctcaggccgggatgccaacttcctggaagaagagaggctgctaagagag
tacccccagtcctttgaaaagggggtaccctacctggagttccgctacaagacccgagtc
tacaaacagaccaacctggatgagaaacagctggccaaattgcacacgaagacggggttg
aagaagttcctggaatatgtgcagctcgggacgtccgacaaggtggcaaggctgctggac
aaggggctggaccccaattaccatgactcagattcaggagagacacctttgaccctggcg
gcccagactgaaggctcagtagaggtgattcgaacgctgtgcctgggtggggctcacata
gacttcagggcccgggatggcatgacagcgctgcacaaggctgcatgtgctcggcactgc
ctggcactcacggcacttctggaccttgggggctcccccaactacaaggaccgccgaggg
ctgacccccctgttccacacagccatggtggggggcgacccccgctgctgcgagctgctg
ctgtacaacagggcccagctgggcattgcggatgagaacggctggcaggaaatccaccag
gcctgccaacggggccactctcagcacctggaacacctgctcttctatggggctgagcct
ggagcccagaatgcctcaggaaacacagccctgcacatctgtgctctctacaacaaggag
acctgtgccaggatcctcctttatcgtggagcaaacaaggatgtgaaaaataataacgga
cagacacccttccaggtggctgtgattgctgggaattttgagctgggggagctgatccgt
aaccatcgagaacaggatgtggtacccttccaggagtcccccaagtatgcagcccggcgt
cggggagccccaggtgcagggctgactgtacctccagcgctgctgcgagctaacagcgac
acaagcatggctctgcctgactggatggtgttttcggccccaggggcctcatcatctggg
acccctggccctacctcaggaccccagggccagtcacagccctcagcccccagcactaag
ctcagtagtgggaccctccgaagtgccagcagcccccgaggtgcccgggcacgctcccca
tcccgggggagacatcctgaagatgccaagagacagcctcgaggccggcccagctccagc
gggacaccccgagaagggccggctgggggaactgggggctcagggggccctgggggctcc
ctgggcagcagaggcagacgtaggaagctctattcagcggtacccggacgttccttcatg
gccgtgaagtcataccaggcgcaaggcgagggggagatctctctgagtaaaggcgagaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgagtt
ggctggttcccctctgactgcctagaagaggtggcaaaccgctcccaggagggaagacaa
gaaagccgaagcgacaaggcaaagagactcttcaggcattacacagtgggctcctacgac
agcttcgatgccccaagtctgatcaatgggattgactcagggagtgattacatcatcaag
gagaagacagtcttactgcagaagaaggacagtgaggggttcgggttcgtgctacggggg
gccaaggcgcagacccccatcgaggaattcacccccaccccggccttcccggcgctgcag
tacctcgagtctgtggacgagggtggcgtggcatggcgggctggactacgaatgggagac
ttcctcatcgaggtgaatggacagaatgtagtaaaggttggccaccgtcaggtggtcaac
atgatccgccagggaggcaacacactgatggtcaaggtggtgatggtgaccagacaccca
gacatggacgaggccgtgcacaagaaagcatcccagcaggctaagcggctcccgccccca
gccatctccctgcgttccaagtctatgacctcagagctggaggaaatggtctccccctgg
aagaagaaatttgaatatgaacaacagcctgcgccagtgcccagcatggagaaaaagcgg
actgtgtatcagatggcactcaacaaactggatgagatcttggcggctgctcagcagacc
atcagtgcaagtgagggtcctgggcctggtggcctcgcgtccctgggcaagcaccggccc
aaaggattctttgccactgagtcgagctttgatccccaccaccgctcccagccaagttac
gaccggccttccttcctgcctcctggacctggccttatgctccggcagaagtctattggg
gctgcggaagatgacagaccctacctagcacccccagccatgaaattcagccgtagtctg
tctgtccccggttcagaggacatacccccaccacccaccacatccccaccagaacctccc
tacagcacacctccggccccctcctcttctggccgcctcactccctcccctcggggaggc
cccttcaaccccggttctgggggtcccctctcggcctcctccccttcatctttcgatggg
ccatctcctcctgacacccgtggtgggggcagagagaagagcctgtatcacggtggagcc
ctaccccccgcccatcatcatccacctcatcatcaccatcatcacgccccacctccacag
ccccaccatcaccatgcacaccctcctcacccaccggagatggagacaggaggttccccc
gacgatcccccacctcgattggccctgggaccccagcctagccttcgaggctggcggggc
ggaggacccagcccaacctcaggggccccatcgccttcccaccacagtagcagcggaggc
agcagcggccccactcaggctaccgccctgcgctacttccagctgcccccgagggcggcc
agtgcagctatgtacgtgcctgctcgctcgggccgaggtcgcaagggcccactggtcaag
cagaccaaagtggaaggcgagccccagaagggcagcctccctcctgcgtcctccccaaca
tccccggcgttgccgcggcctgaaccacctccgcccgggccgtcggagaaaaattccatc
cccatccctaccattatcatcaaagccccatccaccagtagcagcggccgcagcagccag
gggagcagcacagaggccgagccccccacccagcccgacagcgcgggcggtggcggatcc
tcgcccagccctgcgcctgccacgtccccggtgccgccgtccccgtcgcccgtgcccacc
cctgggtcgcccagcggcccggccaccctggacttcaccagccagtttggagcagccctg
gtgggcgcggcgcggagggagggaggctggcagaacgaagcccggcggcggtccacgctg
ttcctgtccaccgatgcgggagatgaggatggaggcgacagcgggctgggcccgggggcg
cccccaggtccccggctgcgccattccaaatccattgatgaaggcatgttctccgccgag
ccgtacctccggctagagtcggggggcagcagcgggggctacggggcctatgcagccggc
agccgagcctacgggggcagcgggagcagcagcgccttcactagcttcctacccccgagg
cccctggtgcatccgctgactggcaaggccttggatcccgcctctccgctggggctggcc
ttggccgcccgggagcgggccttgaaggaatcctcggacggtgggggcaccccccagccg
cctccgagacccccatcgccacgctacgacgccccgccgcccacccttcaccaccactca
ccccactcaccccattcgccacatgcgcgtcacgagccagtgttgcgcctctggggggac
ccggcgcgccgggagctggggtaccgggcaggcctagggagtcaggagaaggctcttccc
gccagtccacctgcagctcgccgctctctactgcaccgtctacccccgacggctcctggg
gtcgggccgctcctgctgcagctggggccggaacccccaactccccttcccggggtgagc
aaggcctggcgcactgcagcccccgaggagcccgagcggctgcctctgcacgtgcggttc
cttgagaattgccaggcccggcctcccgcagcgggagcgagagggtcttccactgaagat
gggcctggggttccaccgcccagccctcgcagggtcttgccagcctctccaacctccccg
cgggtcagtgaggagaacggccttccgctgctggtcctgccgccgccagccccttcggtg
gatgtggacgacggcgagtttctttttgcggagccgctgcctccacccctggagttttcc
aatagcttcgaaaagccagagtcgcctctcacgcccgggcctccccacccgctgccagac
cctccctccccggctacccctctacctgcagccccacccccggctgtggccgcagcccct
cccaccctggattccaccgcatctagcctgacctcttacgacagcgaagtggccacgctg
acccagggggctcctacggctcctggggatactcctgctccaggcccgccggccccagca
gccccagctcccccagccccgcagccaggccccgatcctccacctggcacggattctgga
atcgaggaggtggacagtcggagcagcagcgatcacccgctggagaccatcagcagcgcg
tccacactcagcagtttgtcggccgaaggaggaggcaacacagggggcgtggctgggggc
ggggccggggtggccagtgggacggagctcctggacacctacgttgcctacctggatggc
caggccttcgggggcagtgggactcccggcccgccataccccccacagctcatgactccc
tccaagctccggggccgggcgcttggggctggtggaaatttgagacctggtcccagtggg
ggactccgagatcctgtcacccccaccagccctactgtctctgtgaccggagctggaaca
gatgggctactggccttgagtgcttgctccggaccctcaacggcaggtgtggcagggggt
cccgtggcggttgagccagaagtcccgccagtacctttgcccactgcctcgtccttgcct
cggaagctgctaccgtgggaggagggtccgggacccccaccgccacccctgccagggccc
ctgtcccagcctcaggcctctgccttggccacggtcaaagccagcatcatcagcgaactc
agctccaagctccagcagtttggtgggtcctctgccgcgggaggagctctgccctgggct
cggggaggcagcgggggcagcacagacagccaccacggaggagccagttacatcccagag
aggacctcctccctgcagcgccagaggctctccgaagactcccagacctctctcctctcc
aaacccagcagcagcatctttcagaactggcctaaaccccctctgcctccactccccacc
ggatctggggtctcctcttcgacggctgcagccccgggagctatctccccttcagcctca
tccgcctcggcttccagccgacacctgcagggcgtggaatttgagatgcggcctccgttg
ctccgccgggcacccagcccctcgctgctgcctgcctcggatcacaaggtcagcccagcg
cccaggccctcttctttgcccatcctgccttcaggacccctctacccgggcctcttcgac
atccgtagctccccgaccggaggggcaggaggctcggctgacccctttgctccagtcttt
gtgccgccacaccccgggatatctgggggtctcggaggagccttgtcgggggcctctcgc
tccctatcacccacccgcctgctctcgctaccccccgacaagccgttcggcgccaagcct
ctggggttctggaccaagtttgacgtcgccgattggctggagtggctgggcttatcagag
caccgagcccagttcctggaccatgagattgatggctcccacctgcccgccttgaccaag
gaggactatgtggacctgggcgtgaccagggtgggccaccgtatgaacattgaccgggct
ctcaaatttttcctggagaggtga
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