Peromyscus maniculatus bairdii (prairie deer mouse): 102925199
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Entry
102925199 CDS
T11302
Symbol
Poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03410
Base excision repair
pmav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102925199 (Poll)
03450 Non-homologous end-joining
102925199 (Poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102925199 (Poll)
Enzymes [BR:
pmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102925199 (Poll)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102925199 (Poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102925199 (Poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
HHH
NTP_transf_2
BRCT
Motif
Other DBs
NCBI-GeneID:
102925199
NCBI-ProteinID:
XP_006988254
Ensembl:
ENSPEMG00000006876
UniProt:
A0A6I9LQA8
LinkDB
All DBs
Position
1:complement(197998990..198011993)
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AA seq
573 aa
AA seq
DB search
MDPQGILKAFPKRKKIHAESSSKALAKIPRREAGEAGEWLSSLKAHIMPTGIGRARAELF
EKQIIHHGGQVCSAQAPGVTHIVVDENMDCQRALRLLRLPRLPPSVQLVKSAWLSLCLQE
RRLMDTAGFSLSLPKSSLDQAQPSKADRGSSAPDPQEAASRTTLSLPSPHTGTASPPPKA
EKAPRTPAQLSSDDETSDEEGPQVSSADLEALISGHYPTSPEENGGPDPAPEALEKWVCA
QPSSQKTTNYNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVSSYQEACSI
PGIGKRMAEKILEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRNLDD
IRSLSSLTAQQAIGLKHYDDFLDRMPREEAAEIEQTVRLSAQAFNPGLLCVACGSYRRGK
VTCGDVDVLITHPDGRSHQGIFSRLLDSLRQQGFLTDDLVSQEDNGQQQKYLGVCRLPGP
GRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQG
VKVGSGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagggtatcttgaaggcgtttcccaagcgaaagaaaatccatgcagagtca
tcatcaaaagcacttgcgaagattcccagaagggaagcgggagaagctggagaatggctg
agctccttgaaggctcacattatgcccaccggcattgggcgagcccgggctgagctcttt
gaaaagcagattatccatcatggcggccaggtgtgctctgcccaggccccaggagtcact
cacattgtggtggatgaaaacatggactgtcagcgtgctctccgactcctcagactgccc
cggctaccccccagtgttcagctggtgaagtcagcctggctgagcttgtgcctgcaggag
agaaggctgatggacacggccggattcagcctttccctgcccaagagttccttggaccaa
gcccagcccagcaaggcagaccgaggctcttctgcccctgacccccaggaggccgcatcc
aggacgaccctctctcttccctctcctcacaccggaactgcatctcctcctccaaaggca
gaaaaagcaccaagaaccccagcgcagctcagttcagatgatgaaaccagtgatgaggaa
ggaccccaggttagctcagcagatctggaagccttgatcagtgggcactatcccacttcc
cctgaggaaaatggtggacctgacccagccccagaagccctggagaagtgggtctgtgca
cagccctcgagccagaagacaactaattacaacctgcatatcacagagaagctagaagtt
ctggctaaagcctacagtgtccagggagacaagtggagggccctgggctacgccaaggcc
atcaatgccctcaagagcttccacaagcctgtgagctcctaccaggaggcctgcagcatc
ccagggattggcaagcggatggctgagaagatcctggagatcctggagagcgggcatctg
cggaagctcgaccacatcagtgacagtgtgcctgtcttggagctcttctccaacatctgg
ggagctgggaccaagactgcccagatgtggtaccatcagggtttccggaacctagacgac
atccgcagcctgagctccctgactgctcagcaggccattggtttgaagcactatgacgac
ttcctggaccgcatgccccgggaggaggctgcggagattgagcagacagtccggctgtca
gcccaggccttcaatcccgggctgctgtgtgtggcctgtggctcttaccgaagggggaag
gtgacctgcggggacgtggatgtgcttatcactcacccagatggccggtcccaccagggc
atcttcagccgcctcctggacagccttcggcagcaagggttcctcacagatgacttggtg
agccaggaggacaatggccagcagcagaagtacttgggagtgtgccggcttccggggccc
gggcggcggcaccggcggctggacattatcgtcgtgccctacagtgagttcgcctgtgcc
ctgctctacttcactggctccgctcacttcaaccggtccatgcgagctctggccaagacc
aagggcatgagcctgtccgagcacgccctcagcgcagctgtggtccgcaacagccaaggt
gtcaaggtggggtctgggcgagtgctgcccacccccacagagaaggatgtcttccggctc
ttaggcctgccctaccgagagccggctgagcgggactggtga
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