Peromyscus maniculatus bairdii (prairie deer mouse): 102925334
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Entry
102925334 CDS
T11302
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03082
ATP-dependent chromatin remodeling
pmav05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102925334 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102925334 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102925334 (Arid2)
03021 Transcription machinery [BR:
pmav03021
]
102925334 (Arid2)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102925334 (Arid2)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Helix-turn-helix
ARID
102925334 (Arid2)
Transcription machinery [BR:
pmav03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102925334 (Arid2)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
102925334 (Arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
102925334
NCBI-ProteinID:
XP_006974392
Ensembl:
ENSPEMG00000014806
UniProt:
A0A6I9LB57
LinkDB
All DBs
Position
20:65833967..65979107
Genome browser
AA seq
1834 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFHFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKAHEDTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDIACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASGPASRTVVAQHAVPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYRCLRTVFPNHTVKRVEDSSNSGQAHIHVIGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVADVSPTPSPAGIPHGSQAVGNHFQRTPVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQSAPVTVIQNKAPVPCEVVKATVIQ
NSLPPTAVPVSVALGGGPAQGSVVQNHSTGPQPVTVVNSQTLLHHPSVMSQPSPLHTVVP
GQIPSGTPVTVIQQTVPQSHLFGRVQNMPACTSTVSQGQQLISTSPQPLHTSSQQTAAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPTTNNQVPTAMSSSSPLQSQGPPPTVSQMLSVKRQQQQQHSPA
PPAQQVQVQVQQPQQVQMQVQPQQTNAGVAQPASNESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSTMPSTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGSAAQLIAPAG
IGMSGAQAGAGLQVQTLAAGQSPCTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEVM
ENPSCRRGTTSTSNGDTSESELQVGSLLNGRKYSDSSLPPSNSGKIQSETNQCSLISNGP
SLELGENGASAKQNSEQVDMQDIKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTSSNHV
GNGEISPVEPQGTSDATQQDTAKGDQLERVSNGPVLTLGGSPSTSSMQEASSVATQQFSG
TDLPNGPLASSLNSDVPQQRPSVVVSPHSTTPVIQGHQILAVPHSGSRVSHSALSTDVRS
TNGTAECKTVKRPAEENDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTV
AKVAIESAVQQKQQQQQQQHPPSYMQSVVPQNTPMPPSPAVQAQGQPNSSQPSPLSASGQ
HADPVRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQVANQKSSTKQPALGGTGSAPRAQKAIASHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQERDSEML
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagccgagggtcgccgtttaagaagatccccgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaatcgttgaagagttccactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcatcattttggggaagatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaatcccatcttcctacaattaccagcaacacagtgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaactcgccaaatgattataataaa
ctggtgctttcactgttatccggactcccgaacgaggtggacttcgctattaatgtgtgc
acgctcctatccaatgaaagcaagcacgccatgcagctggagaaggaccccaaaatcatc
accttactacttgctaatgctggggtgtttgatgacactttaggatcattctctactgtc
tttggagaagaatggagagagaagactgatagagactttgttaagttttggaaagacatt
gttgatgacaatgaagtacgtgacctcatttctgacagaaacaaggctcacgaagataca
tcaggagaatggatttgggaatctttatttcatccacctcggaagctgggcattaatgac
attgaaggacagcgggtacttcagattgcagtgattttgcgaaacctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgcacctgtcttcgtttcctgttactctctgca
catagtcattttatttcattaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctcatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggcgttttgatttgtgagtatgtggatcaagactcatat
agagagataatttgtcacctcactctgcccgatgtgctgcttgtaacctcaacactagag
gtgctgtacatgctcactgaaatgggagatatcgcctgcacaaaaattgcaaaagtggaa
aagagcatagatatgctagtgtgcctggtttctatggacattcagatgtttggccctgat
gcactagctgcagtgaaacttgtcgaacatccaagctccagtcatcaagttttatctgaa
attaggccacaagctatagagcaagtccaaacccagacccatgtagcatctggcccagct
tccagaacagttgtagcccagcatgctgttccacctccaggaatagtggaaatagatagt
gaaaagtttgcctgtcagtggctaaatgctcactttgaagtaaatccagattgctcagtc
tctcgagcagaaatgtattctgagtatctctcaacttgtagtaaattagctcgtggtggc
attctcacatcaactgggttttacagatgtctgagaacagtttttccaaatcatacagta
aagagagtggaggattccagtaacagtgggcaggctcatatccatgtaataggagtgaaa
cggagggctattccactccccatccagatgtactatcagcagcagccagtttccactcct
gttgtccgtgttgattctgttgctgatgtatctccaactccttcacctgcaggaatccct
catggatctcaagctgtaggaaatcattttcagaggactcctgttaccaatcaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttctagaattccaccaaatccttcagttcatacccaccagcaacaaagtgctccagtg
actgtcattcagaataaggctccagttccttgtgaggtcgttaaggcaacagtcatccag
aattccctgcccccaacagcagttcctgtgagtgttgctcttggaggagggcctgcacag
ggttctgtggtccagaatcacagtacagggccccagcctgtgacagttgtgaactctcag
actttgcttcaccatccatctgtgatgtcacagccatctccattacacacagtggtcccg
ggacagatcccttcaggtactcctgtcacagtaatccagcaaactgtaccacagagtcat
ctatttggaagagtacagaacatgccagcatgtacgtctacagtttcacagggtcaacaa
ttaatcagcacatcaccacaacctttgcacacttcatctcaacagacagcggctggtagc
cagcctcaagatactgttatcatagcacccccacagtacgtaacaacttctgcatccaac
atcgtttcagcaacttcagtacagaatttccaggtagctacaggacaggtggttaccata
gctggtgttccaagtccacagccctccagggtaggattccagaacattgcacccaaaccg
cttccttctcagcaagtttcatcaacagtggtacagcagcctattcaacaaccacagcaa
ccaacccagcaaagtgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaacccggcagctctcccagctggtcagacagtt
cagctaactggacaaccaaacataactccatcttcttcaccatcacctgtccccaccact
aataaccaagtccctactgccatgtcatcttcttccccccttcagtcacagggaccacct
cctactgtcagtcagatgctatctgtgaagaggcagcaacagcagcagcattcaccagca
cctcccgcacagcaggtccaggtacaagttcaacagccacaacaagtacagatgcaagtt
cagccccagcaaacaaatgcaggagtagcccagcctgcttccaatgagtctagtctgata
aaacagctgctgcttcccaagcggggtccttccaccccagggggtaagctgatcctccca
gcaccacagattcctccccctaacaatgcaagagctcccagccctcaggtggtctatcag
gtggccaataaccaagcagctggttttggagtgcaggggcagactccagctcagcagctg
ttggttggccagcaaaatgttcagttggtccaaagtacaatgccatcaacagggggagtg
caaacagtgcccatttcgaacttacagatactgccgggtccactgatctccaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacc
agttttgcgactgcaaccgtgagtcagggaagtgcagctcagctcattgctccagcagga
attggcatgagtggagcgcaggcaggagccgggcttcaggtgcaaacgcttgcagccgga
caatcaccatgtaccactgctacccccccattcaaaggcgataagatcatttgtcagaag
gaggaggaagcaaaggaagcaacaggtttacatgtgcatgaacggaaaattgaggtcatg
gagaatccgtcctgccgacgaggaaccacaagcaccagcaacggggatacaagtgaaagt
gaactacaggtgggcagccttttaaatgggagaaagtacagtgactcaagtctacctcct
tcaaactcagggaagattcagagtgagactaatcagtgctcactaatcagcaatgggcca
tccttggaattaggtgagaatggagcatctgcaaaacagaactcagaacaagtggacatg
caggatatcaaaagtgatttgaaaaaaacccttgttaatgggatctgtgattttgataaa
ggagatggttctcatttaagcaaaaacattccaaatcacaaaacttcttctaatcatgtt
ggaaatggtgagatatctccagtagaaccacaagggacttcagatgctactcagcaagat
actgccaaaggtgatcaattagaaagagtttctaatggacctgtgttaactttgggtggg
tcaccgtccacaagcagtatgcaggaagcgtcaagtgtggcaacacagcaattcagtggt
actgatttgcctaatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgc
ccaagtgtagttgtctcaccgcattctacaacccctgttatacaggggcatcaaatccta
gcagttccccactcaggatctagagtgtcccattctgccctgtcgactgacgtccggtct
acaaatggcacagcggaatgcaaaactgtgaagaggccggccgaggagaacgatcgggaa
acagtcccaggaattccaaataaagtaggagtgaggattgttacaatcagtgaccccaac
aatgctggctgcagcgcaaccatggttgctgtaccagcaggagcggatccaagcacggta
gctaaagtagcaatagaaagtgctgtgcagcaaaagcagcagcagcagcagcagcagcat
ccaccatcctacatgcagagtgtggtcccgcagaacactcccatgccgccttcaccagct
gtacaagcgcagggccagcctaacagttctcagccttctccactcagtgcatccggtcag
cacgcagatccagtgaggaaacctgggcagaacttcatgtgtctatggcagtcttgtaaa
aagtggtttcagacgccctcccaggtgttctaccatgcagctactgaacatggaggcaag
gacgtgtacccgggccagtgtctctgggaaggctgtgagcctttccagagacagaggttc
tccttcatcacccacttacaggacaagcactgttcaaaagatgctctgctggcaggatta
aaacaagatgaaccaggacaagtggcaaatcaaaaatcttctaccaagcagccagcttta
gggggcacaggctcagctcctcgagcccagaaggccattgcgagtcaccccagtgctgcc
ctcatggctcttaggagaggctcaaggaaccttgtcttccgggactttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatattcagagtgtgggcgcagattgttaaagagacacgaaaacaacctatccgtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttacgaacttaatttt
acagttcagagtaaagaacaagaaagagactcagaaatgctgtag
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integrated database retrieval system
